RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 TANKQ92844 425 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 CNRIP1Q96F85 164 aaPredicted RBP9.9□□□□□ -0.82
LIG1-210ENST00000596332 TEX37Q96LM6 180 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 PPP3R2Q96LZ3 170 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 CENPKQ9BS16 269 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 C1orf50Q9BV19 199 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 ALOXE3Q9BYJ1 711 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 COPS7BQ9H9Q2 264 aaPredicted RBP9.9□□□□□ -0.82
LIG1-210ENST00000596332 MYNNQ9NPC7 610 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 SLAMF7Q9NQ25 335 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 PRTFDC1Q9NRG1 225 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 MS4A12Q9NXJ0 267 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 TAS2R7Q9NYW3 318 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 VTI1BQ9UEU0 232 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 PHF11Q9UIL8 331 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 ZNF223Q9UK11 482 aaPredicted RBP9.9□□□□□ -0.82
LIG1-210ENST00000596332 PPIEQ9UNP9 301 aaKnown RBP9.9□□□□□ -0.82
LIG1-210ENST00000596332 SCN2AQ99250 2005 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 GOLGA8QA0A0J9YX86 632 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 C1orf226A1L170 272 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 GOLGA8OA6NCC3 632 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 GABRR3A8MPY1 467 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 GOLGA8NF8WBI6 632 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 HRKO00198 91 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 TBX19O60806 448 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 CEACAM4O75871 244 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 DNAJB5O75953 348 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 TGDSO95455 350 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 GPR75O95800 540 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 IGHEP01854 428 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 CLPSP04118 112 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 C8orf89P0DMQ9 161 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 G6PDP11413 515 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 DRD2P14416 443 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 JAK1P23458 1154 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 IL12AP29459 219 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 SOX8P57073 446 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 TMPRSS3P57727 454 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 C21orf58P58505 322 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 CXADRP78310 365 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 PHC1P78364 1004 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 PTGR1Q14914 329 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 TBR1Q16650 682 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 IMPG1Q17R60 797 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 LSM12Q3MHD2 195 aaKnown RBP9.89□□□□□ -0.83
LIG1-210ENST00000596332 SFT2D3Q587I9 215 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 DCAF10Q5QP82 559 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 TMEM198Q66K66 360 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 CRLF3Q8IUI8 442 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 APLFQ8IW19 511 aaPredicted RBP9.89□□□□□ -0.83
LIG1-210ENST00000596332 HOMEZQ8IX15 550 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 ARFGAP2Q8N6H7 521 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 EFCAB3Q8N7B9 438 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 ZNF321PQ8N8H1 164 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 SIMC1Q8NDZ2 872 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 ACTRT2Q8TDY3 377 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 ADAMTS18Q8TE60 1221 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 PPWD1Q96BP3 646 aaKnown RBP9.89□□□□□ -0.83
LIG1-210ENST00000596332 TUBGCP3Q96CW5 907 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 NPAS2Q99743 824 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 TRIM4Q9C037 500 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 RYDENQ9NUL5 291 aaKnown RBP9.89□□□□□ -0.83
LIG1-210ENST00000596332 FBXL4Q9UKA2 621 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 PADI2Q9Y2J8 665 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 TMED5Q9Y3A6 229 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 GPR45Q9Y5Y3 372 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 MED13Q9UHV7 2174 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 CACNA1GO43497 2377 aa9.89□□□□□ -0.83
LIG1-210ENST00000596332 TMEM200CA6NKL6 621 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 MYO1GB0I1T2 1018 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 SLCO1B7G3V0H7 640 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 K7EM74 188 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 PSMD12O00232 456 aaPredicted RBP9.88□□□□□ -0.83
LIG1-210ENST00000596332 SCN2BO60939 215 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 DDAH2O95865 285 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 CT62P0C5K7 136 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 NR2F6P10588 404 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 DDCP20711 480 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 PTGER1P34995 402 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 FRKP42685 505 aaPredicted RBP9.88□□□□□ -0.83
LIG1-210ENST00000596332 UCNP55089 124 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 ERVK-8P63133 956 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 EEF1A2Q05639 463 aaKnown RBP9.88□□□□□ -0.83
LIG1-210ENST00000596332 ZNF763Q0D2J5 394 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 C2orf80Q0P641 193 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 CHAF1BQ13112 559 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 DUSP8Q13202 625 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 DEFB109BQ30KR1 87 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 ATP6AP1LQ52LC2 224 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 ANKRD26P1Q6NSI1 321 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 NDUFAF7Q7L592 441 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 LIX1Q8N485 282 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 KRTCAP2Q8N6L1 136 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 APCDD1LQ8NCL9 501 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 CLHC1Q8NHS4 586 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 DOK4Q8TEW6 326 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 DYDC1Q8WWB3 177 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 STON2Q8WXE9 905 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 THAP4Q8WY91 577 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 CTHRC1Q96CG8 243 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms