RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 LILRA6Q6PI73 481 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 ZNF517Q6ZMY9 492 aaPredicted RBP15.7■□□□□ 0.1
LIG1-206ENST00000594067 CCDC149Q6ZUS6 474 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 VN1R5Q7Z5H4 357 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 LRRC56Q8IYG6 542 aaPredicted RBP15.7■□□□□ 0.1
LIG1-206ENST00000594067 BARHL1Q9BZE3 327 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 EXOSC4Q9NPD3 245 aaKnown RBP15.7■□□□□ 0.1
LIG1-206ENST00000594067 CNOT2Q9NZN8 540 aaKnown RBP15.7■□□□□ 0.1
LIG1-206ENST00000594067 BOLA1Q9Y3E2 137 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 SH3D21A4FU49 640 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 CENPXA8MT69 81 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 RTCAO00442 366 aaKnown RBP15.7■□□□□ 0.1
LIG1-206ENST00000594067 NDUFB5O43674 189 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 FGF18O76093 207 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 BCHEP06276 602 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 RPS19P39019 145 aaKnown RBP15.7■□□□□ 0.1
LIG1-206ENST00000594067 CDK10Q15131 360 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 ZNF770Q6IQ21 691 aaPredicted RBP15.7■□□□□ 0.1
LIG1-206ENST00000594067 REEP3Q6NUK4 255 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 ERAP2Q6P179 960 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 HORMAD2Q8N7B1 307 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 FBXO15Q8NCQ5 510 aaPredicted RBP15.7■□□□□ 0.1
LIG1-206ENST00000594067 NRTNQ99748 197 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 CNPPD1Q9BV87 410 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 SMURF1Q9HCE7 757 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 TDP1Q9NUW8 608 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 HCFC2Q9Y5Z7 792 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 V9GYH0 126 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 LILRB5O75023 590 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 CXCL14O95715 111 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 UQCRC2P22695 453 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 MRPS15P82914 257 aaKnown RBP15.69■□□□□ 0.1
LIG1-206ENST00000594067 SEC23BQ15437 767 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 BAK1Q16611 211 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 PRR23CQ6ZRP0 262 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 FAM46DQ8NEK8 389 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 ASB15Q8WXK1 588 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 RAB8BQ92930 207 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 DMRTB1Q96MA1 342 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 OPALINQ96PE5 141 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 RSPO3Q9BXY4 272 aaPredicted RBP15.69■□□□□ 0.1
LIG1-206ENST00000594067 ABCG4Q9H172 646 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 SLAMF7Q9NQ25 335 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 DYRK4Q9NR20 520 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 DNAJC27Q9NZQ0 273 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 ENOPH1Q9UHY7 261 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 MKI67P46013 3256 aaKnown RBP15.69■□□□□ 0.1
LIG1-206ENST00000594067 ANKDD1BA6NHY2 528 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 C5orf58C9J3I9 102 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 TLR4O00206 839 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 SOD1P00441 154 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 ALDH9A1P49189 494 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 TMIGD1Q6UXZ0 262 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 WDR53Q7Z5U6 358 aaPredicted RBP15.69■□□□□ 0.1
LIG1-206ENST00000594067 RAB43Q86YS6 212 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 SLC38A5Q8WUX1 472 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 MTERF3Q96E29 417 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 ASPNQ9BXN1 380 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 C5AR2Q9P296 337 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 CLEC2DQ9UHP7 191 aa15.69■□□□□ 0.1
LIG1-206ENST00000594067 RGS5O15539 181 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 MPZL2O60487 215 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 SOX3P41225 446 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 NFE2L1Q14494 772 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 ZNF79Q15937 498 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 RBM45Q8IUH3 476 aaKnown RBP15.68■□□□□ 0.1
LIG1-206ENST00000594067 GPR32P1Q8NGA4 272 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 VANGL1Q8TAA9 524 aaPredicted RBP15.68■□□□□ 0.1
LIG1-206ENST00000594067 GPR151Q8TDV0 419 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 DTD2Q96FN9 168 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 HHIPL1Q96JK4 782 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 PHOX2BQ99453 314 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 HHATLQ9HCP6 504 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 KCND3Q9UK17 655 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 SH3BP5O60239 455 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 SEMA7AO75326 666 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 MOSPD3O75425 235 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 ARMC4Q5T2S8 1044 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 RAET1GQ6H3X3 334 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 UNC5DQ6UXZ4 953 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 BCDIN3DQ7Z5W3 292 aaKnown RBP15.68■□□□□ 0.1
LIG1-206ENST00000594067 GALNT12Q8IXK2 581 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 TMEM19Q96HH6 336 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 TMEM246Q9BRR3 403 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 UCK2Q9BZX2 261 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 TRPV5Q9NQA5 729 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 REV1Q9UBZ9 1251 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 TMCC3Q9ULS5 477 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 PRKAB1Q9Y478 270 aa15.68■□□□□ 0.1
LIG1-206ENST00000594067 MEIOCA2RUB1 952 aa15.67■□□□□ 0.1
LIG1-206ENST00000594067 OR10H3O60404 316 aa15.67■□□□□ 0.1
LIG1-206ENST00000594067 OPRD1P41143 372 aa15.67■□□□□ 0.1
LIG1-206ENST00000594067 PRAMEF14Q5SWL7 426 aa15.67■□□□□ 0.1
LIG1-206ENST00000594067 PRAMEF13Q5VWM6 474 aa15.67■□□□□ 0.1
LIG1-206ENST00000594067 SLC39A5Q6ZMH5 540 aa15.67■□□□□ 0.1
LIG1-206ENST00000594067 DEF8Q6ZN54 512 aa15.67■□□□□ 0.1
LIG1-206ENST00000594067 ANKRD33Q7Z3H0 272 aa15.67■□□□□ 0.1
LIG1-206ENST00000594067 SLC9B2Q86UD5 537 aa15.67■□□□□ 0.1
LIG1-206ENST00000594067 SLC34A3Q8N130 599 aa15.67■□□□□ 0.1
LIG1-206ENST00000594067 APOBEC4Q8WW27 367 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms