RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 WDR92Q96MX6 357 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 FAIM2Q9BWQ8 316 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 HEMK1Q9Y5R4 338 aaPredicted RBP18.67■□□□□ 0.58
CLIP3-206ENST00000593074 H0Y8X5 98 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 J3KTA2 159 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 HMGN4O00479 90 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 GABRG2P18507 467 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 CMPK1P30085 196 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 KCNC4Q03721 635 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 DUSP7Q16829 419 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 ZNF425Q6IV72 752 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 WASH2PQ6VEQ5 465 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 LGI4Q8N135 537 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 TBC1D19Q8N5T2 526 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 AMDHD1Q96NU7 426 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 KCNC2Q96PR1 638 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 DCUN1D5Q9BTE7 237 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 ZSCAN32Q9NX65 697 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 OR6C2Q9NZP2 312 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 POFUT2Q9Y2G5 429 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 SH3GLB1Q9Y371 365 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 PCDHGA6Q9Y5G7 932 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 PCDHGA4Q9Y5G9 962 aa18.66■□□□□ 0.58
CLIP3-206ENST00000593074 A0A1W2PPW3 197 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 C5orf58C9J3I9 102 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 MAN2B1O00754 1011 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 ERI3O43414 337 aaKnown RBP18.65■□□□□ 0.58
CLIP3-206ENST00000593074 RHCEP18577 417 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 CD247P20963 164 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 HIST1H1TP22492 207 aaPredicted RBP18.65■□□□□ 0.58
CLIP3-206ENST00000593074 CCT3P49368 545 aaKnown RBP18.65■□□□□ 0.58
CLIP3-206ENST00000593074 CCINQ13939 588 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 LRRC32Q14392 662 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 SLC9A5Q14940 896 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 MAPK11Q15759 364 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 RPS26P11Q5JNZ5 115 aaPredicted RBP18.65■□□□□ 0.58
CLIP3-206ENST00000593074 MRM1Q6IN84 353 aaKnown RBP18.65■□□□□ 0.58
CLIP3-206ENST00000593074 ABHD17CQ6PCB6 329 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 TMEM145Q8NBT3 493 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 OR2L5Q8NG80 312 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 OR52J3Q8NH60 311 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 GAB3Q8WWW8 586 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 GLIPR2Q9H4G4 154 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 SERHL2Q9H4I8 314 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 SLC35C2Q9NQQ7 365 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 PRDM7Q9NQW5 492 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 ACER3Q9NUN7 267 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 SCN3BQ9NY72 215 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 AASSQ9UDR5 926 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 KCND3Q9UK17 655 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 ASB4Q9Y574 426 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 PCDHGA2Q9Y5H1 932 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 TMX2-CTNND1H3BSU7 103 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 PCDHGA12O60330 932 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 WBP4O75554 376 aaKnown RBP18.65■□□□□ 0.58
CLIP3-206ENST00000593074 EML2O95834 649 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 IFNW1P05000 195 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 ASGR2P07307 311 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 NDUFS1P28331 727 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 KRT20P35900 424 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 EMX1Q04741 257 aaPredicted RBP18.65■□□□□ 0.58
CLIP3-206ENST00000593074 FGD3Q5JSP0 725 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 TMEM31Q5JXX7 168 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 ENTHD1Q8IYW4 607 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 TSACCQ96A04 125 aaPredicted RBP18.65■□□□□ 0.58
CLIP3-206ENST00000593074 TTYH1Q9H313 450 aaPredicted RBP18.65■□□□□ 0.58
CLIP3-206ENST00000593074 GPN2Q9H9Y4 310 aaPredicted RBP18.65■□□□□ 0.58
CLIP3-206ENST00000593074 RLIMQ9NVW2 624 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 PCOLCE2Q9UKZ9 415 aa18.65■□□□□ 0.58
CLIP3-206ENST00000593074 SNRNP200O75643 2136 aaKnown RBP18.65■□□□□ 0.58
CLIP3-206ENST00000593074 ARRDC5A6NEK1 342 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 NARSO43776 548 aaKnown RBP18.64■□□□□ 0.57
CLIP3-206ENST00000593074 MRPS14O60783 128 aaKnown RBP18.64■□□□□ 0.57
CLIP3-206ENST00000593074 PDE9AO76083 593 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 MFN2O95140 757 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 STATHP02808 62 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 CHRM5P08912 532 aaPredicted RBP18.64■□□□□ 0.57
CLIP3-206ENST00000593074 CCNA2P20248 432 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 CD72P21854 359 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 TSFMP43897 325 aaKnown RBP18.64■□□□□ 0.57
CLIP3-206ENST00000593074 GP2P55259 537 aaKnown RBP18.64■□□□□ 0.57
CLIP3-206ENST00000593074 PUM1Q14671 1186 aaKnown RBP eCLIP18.64■□□□□ 0.57
CLIP3-206ENST00000593074 TPRG1LQ5T0D9 272 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 GPR153Q6NV75 609 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 AMIGO1Q86WK6 493 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 ACOT4Q8N9L9 421 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 MFSD9Q8NBP5 474 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 OR8K5Q8NH50 307 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 FAR1Q8WVX9 515 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 HMGB4Q8WW32 186 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 APH1BQ8WW43 257 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 FKBP10Q96AY3 582 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 MACROD1Q9BQ69 325 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 DGCR6LQ9BY27 220 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 CCDC90BQ9GZT6 254 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 SYNPO2LQ9H987 977 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 CCNB1IP1Q9NPC3 277 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 ERVK-18Q9QC07 812 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 KLF15Q9UIH9 416 aa18.64■□□□□ 0.57
CLIP3-206ENST00000593074 FAM32AQ9Y421 112 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms