RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 PLIN5Q00G26 463 aa17.46■□□□□ 0.39
CCDC43-205ENST00000592333 FAM83EQ2M2I3 478 aa17.46■□□□□ 0.39
CCDC43-205ENST00000592333 PIGGQ5H8A4 983 aa17.46■□□□□ 0.39
CCDC43-205ENST00000592333 EMC4Q5J8M3 183 aa17.46■□□□□ 0.39
CCDC43-205ENST00000592333 NCCRP1Q6ZVX7 275 aaPredicted RBP17.46■□□□□ 0.39
CCDC43-205ENST00000592333 SLC22A8Q8TCC7 542 aa17.46■□□□□ 0.39
CCDC43-205ENST00000592333 DGAT2Q96PD7 388 aa17.46■□□□□ 0.39
CCDC43-205ENST00000592333 DEFB127Q9H1M4 99 aa17.46■□□□□ 0.39
CCDC43-205ENST00000592333 RPF2Q9H7B2 306 aaKnown RBP17.46■□□□□ 0.39
CCDC43-205ENST00000592333 LIN28AQ9H9Z2 209 aaKnown RBP17.46■□□□□ 0.39
CCDC43-205ENST00000592333 IGSF5Q9NSI5 407 aa17.46■□□□□ 0.39
CCDC43-205ENST00000592333 PCDHGB3Q9Y5G1 929 aa17.46■□□□□ 0.39
CCDC43-205ENST00000592333 SUPT3HB4E1H0 165 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 FAM47E-STBD1D6RA91 191 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 H0YIV9 168 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 ZNHIT1O43257 154 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 SUPT3HO75486 399 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 ETHE1O95571 254 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 PCNAP12004 261 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 MTHFD2P13995 350 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 POU3F2P20265 443 aaPredicted RBP17.45■□□□□ 0.38
CCDC43-205ENST00000592333 PIK3CGP48736 1102 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 GUCY2DQ02846 1103 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 DLG1Q12959 904 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 SLAMF1Q13291 335 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 CUL3Q13618 768 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 SLMAPQ14BN4 828 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 ACAP2Q15057 778 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 GXYLT1Q4G148 440 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 MEX3BQ6ZN04 569 aaKnown RBP17.45■□□□□ 0.38
CCDC43-205ENST00000592333 C16orf47Q6ZP98 133 aaPredicted RBP17.45■□□□□ 0.38
CCDC43-205ENST00000592333 CEP128Q6ZU80 1094 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 GPR180Q86V85 440 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 ST13P4Q8IZP2 240 aaPredicted RBP17.45■□□□□ 0.38
CCDC43-205ENST00000592333 FBXO25Q8TCJ0 367 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 FBF1Q8TES7 1133 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 SENP5Q96HI0 755 aaPredicted RBP17.45■□□□□ 0.38
CCDC43-205ENST00000592333 FBXL20Q96IG2 436 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 KCNJ16Q9NPI9 418 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 RNF6Q9Y252 685 aa17.45■□□□□ 0.38
CCDC43-205ENST00000592333 TNPO3Q9Y5L0 923 aaKnown RBP17.45■□□□□ 0.38
CCDC43-205ENST00000592333 PINLYPA6NC86 204 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 UBXN8O00124 270 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 AQP7O14520 342 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 KLK8O60259 260 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 HCN1O60741 890 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 BUD31P41223 144 aaPredicted RBP17.44■□□□□ 0.38
CCDC43-205ENST00000592333 RAP1GDS1P52306 607 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 ALDH18A1P54886 795 aaKnown RBP17.44■□□□□ 0.38
CCDC43-205ENST00000592333 TNFRSF17Q02223 184 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 FOXO1Q12778 655 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 SETDB1Q15047 1291 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 SPRED3Q2MJR0 410 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 ZNF750Q32MQ0 723 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 ZNF791Q3KP31 576 aaPredicted RBP17.44■□□□□ 0.38
CCDC43-205ENST00000592333 C10orf62Q5T681 223 aaPredicted RBP17.44■□□□□ 0.38
CCDC43-205ENST00000592333 SLC22A10Q63ZE4 541 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 FAM47EQ6ZV65 393 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 CMC1Q7Z7K0 106 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 HUS1BQ8NHY5 278 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 EXT2Q93063 718 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 SARAFQ96BY9 339 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 SH2D2AQ9NP31 389 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 DMRT3Q9NQL9 472 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 LYARQ9NX58 379 aaKnown RBP17.44■□□□□ 0.38
CCDC43-205ENST00000592333 QPCTLQ9NXS2 382 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 ANGPTL3Q9Y5C1 460 aa17.44■□□□□ 0.38
CCDC43-205ENST00000592333 OR6C76A6NM76 312 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 FAM166BA8MTA8 275 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 RTCAO00442 366 aaKnown RBP17.43■□□□□ 0.38
CCDC43-205ENST00000592333 PROM1O43490 865 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 FGF17O60258 216 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 WDR1O75083 606 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 PDE9AO76083 593 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 TOXO94900 526 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 ALOX15P16050 662 aaPredicted RBP17.43■□□□□ 0.38
CCDC43-205ENST00000592333 ACVR2AP27037 513 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 MSX1P28360 303 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 MRPS25P82663 173 aaKnown RBP17.43■□□□□ 0.38
CCDC43-205ENST00000592333 TLE4Q04727 773 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 TFF3Q07654 80 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 SLC10A1Q14973 349 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 PCBP2Q15366 365 aaKnown RBP eCLIP17.43■□□□□ 0.38
CCDC43-205ENST00000592333 KLC3Q6P597 504 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 TRILQ7L0X0 811 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 ZNF572Q7Z3I7 529 aaPredicted RBP17.43■□□□□ 0.38
CCDC43-205ENST00000592333 TMEM251Q8N6I4 163 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 ZNF321PQ8N8H1 164 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 PAQR8Q8TEZ7 354 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 NXNL1Q96CM4 212 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 SMC6Q96SB8 1091 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 OR51B5Q9H339 312 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 DDX31Q9H8H2 851 aaKnown RBP17.43■□□□□ 0.38
CCDC43-205ENST00000592333 ACTR8Q9H981 624 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 CNIH4Q9P003 139 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 PYCARDQ9ULZ3 195 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 ATG4BQ9Y4P1 393 aa17.43■□□□□ 0.38
CCDC43-205ENST00000592333 PHF3Q92576 2039 aaKnown RBP17.42■□□□□ 0.38
CCDC43-205ENST00000592333 NPIPA2E9PIF3 369 aa17.42■□□□□ 0.38
CCDC43-205ENST00000592333 NPIPA3F8WFD2 350 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms