RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 ATP5A1P25705 553 aaKnown RBP9.72□□□□□ -0.85
SDF2-208ENST00000589788 NEK2P51955 445 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 CDH13P55290 713 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 HSD17B7P56937 341 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 RPS13P62277 151 aaKnown RBP9.72□□□□□ -0.85
SDF2-208ENST00000589788 SLC18A2Q05940 514 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 IFT88Q13099 833 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 TRAF3Q13114 568 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 MFAP5Q13361 173 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 C10orf62Q5T681 223 aaPredicted RBP9.72□□□□□ -0.85
SDF2-208ENST00000589788 OR4C11Q6IEV9 310 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 RPS27LQ71UM5 84 aaKnown RBP9.72□□□□□ -0.85
SDF2-208ENST00000589788 UBE3DQ7Z6J8 389 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 C4orf33Q8N1A6 199 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 RNF175Q8N4F7 328 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 ACOT4Q8N9L9 421 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 OR4F6Q8NGB9 312 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 ZNF483Q8TF39 744 aaPredicted RBP9.72□□□□□ -0.85
SDF2-208ENST00000589788 PNPLA2Q96AD5 504 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 MTFMTQ96DP5 389 aaKnown RBP9.72□□□□□ -0.85
SDF2-208ENST00000589788 CCDC126Q96EE4 140 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 APOPT1Q96IL0 206 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 SERPINI1Q99574 410 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 WDR77Q9BQA1 342 aaPredicted RBP9.72□□□□□ -0.85
SDF2-208ENST00000589788 C1QTNF3Q9BXJ4 246 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 ELOVL6Q9H5J4 265 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 KCNK13Q9HB14 408 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 ZBTB20Q9HC78 741 aaPredicted RBP9.72□□□□□ -0.85
SDF2-208ENST00000589788 ZBTB26Q9HCK0 441 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 LYRM4Q9HD34 91 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 GRID1Q9ULK0 1009 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 DAPP1Q9UN19 280 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 CNTRLQ7Z7A1 2325 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 IGKV3D-11A0A0A0MRZ8 115 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 TCRBV16S1A1N1A0A5B0 115 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 A8MUA0 341 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 A8MUI8 341 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 PYCARD-AS1I3L0S3 204 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 FOXE1O00358 373 aaPredicted RBP9.71□□□□□ -0.86
SDF2-208ENST00000589788 PLPP1O14494 284 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 COPEO14579 308 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 CREB1P16220 341 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 TSPAN8P19075 237 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 IMPDH1P20839 514 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 CPN2P22792 545 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 CRHR1P34998 444 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 TSFMP43897 325 aaKnown RBP9.71□□□□□ -0.86
SDF2-208ENST00000589788 CD97P48960 835 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 ARFIP1P53367 373 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 SLC18A1P54219 525 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 MLLT10P55197 1068 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 SLC26A5P58743 744 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 TAS2R50P59544 299 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 ARG2P78540 354 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 CLCQ05315 142 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 SLAMF1Q13291 335 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 CUL3Q13618 768 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 CCDC153Q494R4 210 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 PLEKHN1Q494U1 663 aaPredicted RBP9.71□□□□□ -0.86
SDF2-208ENST00000589788 GGTA1PQ4G0N0 100 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 SGO1Q5FBB7 561 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 ZNF678Q5SXM1 525 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 LCE2AQ5TA79 106 aaPredicted RBP9.71□□□□□ -0.86
SDF2-208ENST00000589788 ABHD17BQ5VST6 288 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 FRG2Q64ET8 278 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 IGFL2Q6UWQ7 119 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 ZNF793Q6ZN11 406 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 MTERF4Q7Z6M4 381 aaKnown RBP9.71□□□□□ -0.86
SDF2-208ENST00000589788 CLNKQ7Z7G1 428 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 ZNF595Q8IYB9 648 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 CCNYL1Q8N7R7 359 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 BANPQ8N9N5 519 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 CCDC63Q8NA47 563 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 GOLM1Q8NBJ4 401 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 DNAJB14Q8TBM8 379 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 WDR20Q8TBZ3 569 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 M1APQ8TC57 530 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 TRPC4APQ8TEL6 797 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 CNDP1Q96KN2 507 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 TMEM237Q96Q45 408 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 FRG2BQ96QU4 278 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 MAPKAP1Q9BPZ7 522 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 IQCGQ9H095 443 aaKnown RBP9.71□□□□□ -0.86
SDF2-208ENST00000589788 MMP25Q9NPA2 562 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 NECTIN3Q9NQS3 549 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 PNO1Q9NRX1 252 aaKnown RBP9.71□□□□□ -0.86
SDF2-208ENST00000589788 MS4A12Q9NXJ0 267 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 PSD3Q9NYI0 1048 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 PHF11Q9UIL8 331 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 FBXW2Q9UKT8 454 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 SNX6Q9UNH7 406 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 STK38LQ9Y2H1 464 aa9.71□□□□□ -0.86
SDF2-208ENST00000589788 BLACEA4D250 179 aa9.7□□□□□ -0.86
SDF2-208ENST00000589788 SYNDIG1LA6NDD5 238 aa9.7□□□□□ -0.86
SDF2-208ENST00000589788 SAGE2PA6NJ88 616 aa9.7□□□□□ -0.86
SDF2-208ENST00000589788 LINC01387J3KSC0 135 aa9.7□□□□□ -0.86
SDF2-208ENST00000589788 CYR61O00622 381 aa9.7□□□□□ -0.86
SDF2-208ENST00000589788 TYROBPO43914 113 aa9.7□□□□□ -0.86
SDF2-208ENST00000589788 CTNSO60931 367 aa9.7□□□□□ -0.86
SDF2-208ENST00000589788 SORBS2O94875 1100 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms