RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 TBX19O60806 448 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 ERAL1O75616 437 aaKnown RBP14.26□□□□□ -0.13
ATG4D-211ENST00000589753 GPR75O95800 540 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 RECKO95980 971 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 CYC1P08574 325 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 MAOAP21397 527 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 F8A1P23610 371 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 PIK3R1P27986 724 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 EMP2P54851 167 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 FOLH1Q04609 750 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 STX4Q12846 297 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 UGT8Q16880 541 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 CPTPQ5TA50 214 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 FAM69BQ5VUD6 431 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 ANKRD26P1Q6NSI1 321 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 MTDHQ86UE4 582 aaKnown RBP14.26□□□□□ -0.13
ATG4D-211ENST00000589753 TMEM151BQ8IW70 566 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 OR4N5Q8IXE1 308 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 ANKS4BQ8N8V4 417 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 GLB1L3Q8NCI6 653 aaPredicted RBP14.26□□□□□ -0.13
ATG4D-211ENST00000589753 ZNF248Q8NDW4 579 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 PLPP5Q8NEB5 264 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 OR7A2PQ8NGA2 310 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 OR4K14Q8NGD5 310 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 GATA6Q92908 595 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 EXOSC8Q96B26 276 aaKnown RBP14.26□□□□□ -0.13
ATG4D-211ENST00000589753 ANKRD9Q96BM1 317 aaPredicted RBP14.26□□□□□ -0.13
ATG4D-211ENST00000589753 TESCQ96BS2 214 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 EFHD1Q9BUP0 239 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 NMUR2Q9GZQ4 415 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 CLMPQ9H6B4 373 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 CCDC86Q9H6F5 360 aaKnown RBP14.26□□□□□ -0.13
ATG4D-211ENST00000589753 NECTIN3Q9NQS3 549 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 SAR1AQ9NR31 198 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 GIMAP4Q9NUV9 329 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 ATAD3AQ9NVI7 634 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 WDR70Q9NW82 654 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 TAS2R7Q9NYW3 318 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 SH3BP4Q9P0V3 963 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 C3orf18Q9UK00 162 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 PCDHGA6Q9Y5G7 932 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 IGKV3D-11A0A0A0MRZ8 115 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 FCHO1O14526 889 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 TLX3O43711 291 aaPredicted RBP14.25□□□□□ -0.13
ATG4D-211ENST00000589753 ALOX12BO75342 701 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 UMODP07911 640 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 IL12AP29459 219 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 EFNA3P52797 238 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 RPS18P62269 152 aaKnown RBP14.25□□□□□ -0.13
ATG4D-211ENST00000589753 IGLV3-21P80748 117 aaPredicted RBP14.25□□□□□ -0.13
ATG4D-211ENST00000589753 ID2Q02363 134 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 SRSF11Q05519 484 aaKnown RBP14.25□□□□□ -0.13
ATG4D-211ENST00000589753 CLN3Q13286 438 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 SERTAD2Q14140 314 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 UBAP2LQ14157 1087 aaKnown RBP14.25□□□□□ -0.13
ATG4D-211ENST00000589753 NSDHLQ15738 373 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 PRSS53Q2L4Q9 553 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 DPY19L1Q2PZI1 675 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 PGS1Q32NB8 556 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 ZNF385BQ569K4 471 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 SAMD14Q8IZD0 417 aaPredicted RBP14.25□□□□□ -0.13
ATG4D-211ENST00000589753 C7orf57Q8NEG2 295 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 OR9I1Q8NGQ6 314 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 SNIP1Q8TAD8 396 aaKnown RBP14.25□□□□□ -0.13
ATG4D-211ENST00000589753 NUDT8Q8WV74 236 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 KCNE4Q8WWG9 221 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 METTL21AQ8WXB1 218 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 TSLPQ969D9 159 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 NAF1Q96HR8 494 aaKnown RBP14.25□□□□□ -0.13
ATG4D-211ENST00000589753 ALOXE3Q9BYJ1 711 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 SLC35C2Q9NQQ7 365 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 SEMA3GQ9NS98 782 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 TMEM45AQ9NWC5 275 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 ENTPD4Q9Y227 616 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 CLDN16Q9Y5I7 305 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 ZNF780BQ9Y6R6 833 aa14.25□□□□□ -0.13
ATG4D-211ENST00000589753 SPTBN4Q9H254 2564 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 FAM234BA2RU67 622 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 SYNDIG1LA6NDD5 238 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 C9JVG2 144 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 TGFBR3LH3BV60 316 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 DCTN3O75935 186 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 IGHEP01854 428 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 C8orf89P0DMQ9 161 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 LAMP1P11279 417 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 LIFP15018 202 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 CSNK2A2P19784 350 aaPredicted RBP14.24□□□□□ -0.13
ATG4D-211ENST00000589753 XKP51811 444 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 POLR2JP52435 117 aaKnown RBP14.24□□□□□ -0.13
ATG4D-211ENST00000589753 BIKQ13323 160 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 SSPNQ14714 243 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 FAM174BQ3ZCQ3 159 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 AGKQ53H12 422 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 FAAH2Q6GMR7 532 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 FAM180BQ6P0A1 224 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 CAMKMTQ7Z624 323 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 VASH2Q86V25 355 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 COQ8BQ96D53 544 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 CNRIP1Q96F85 164 aaPredicted RBP14.24□□□□□ -0.13
ATG4D-211ENST00000589753 DUSP26Q9BV47 211 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms