RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 SLC1A2P43004 574 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 BDKRB1P46663 353 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 AVPR1BP47901 424 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 DNASE1L1P49184 302 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 ADARP55265 1226 aaKnown RBP5.6□□□□□ -1.51
VPS25-204ENST00000589577 DEFA6Q01524 100 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 FOXF2Q12947 444 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 CTBP1Q13363 440 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 CASP8Q14790 479 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 XKR6Q5GH73 641 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 CEP85LQ5SZL2 805 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 KLC3Q6P597 504 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 TRMT10BQ6PF06 316 aaKnown RBP5.6□□□□□ -1.51
VPS25-204ENST00000589577 LRIG3Q6UXM1 1119 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 PACS1Q6VY07 963 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 GK5Q6ZS86 529 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 OTOAQ7RTW8 1153 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 VN1R4Q7Z5H5 301 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 TBC1D1Q86TI0 1168 aaPredicted RBP5.6□□□□□ -1.51
VPS25-204ENST00000589577 PLD3Q8IV08 490 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 LACC1Q8IV20 430 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 IGDCC3Q8IVU1 814 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 CNTN4Q8IWV2 1026 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 C2CD4AQ8NCU7 369 aaPredicted RBP5.6□□□□□ -1.51
VPS25-204ENST00000589577 CFAP61Q8NHU2 1237 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 SKA2Q8WVK7 121 aaPredicted RBP5.6□□□□□ -1.51
VPS25-204ENST00000589577 PEX11GQ96HA9 241 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 FOPNLQ96NB1 174 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 PAFAH2Q99487 392 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 MACROD1Q9BQ69 325 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 FAM173AQ9BQD7 235 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 AARSD1Q9BTE6 412 aaKnown RBP5.6□□□□□ -1.51
VPS25-204ENST00000589577 BEX2Q9BXY8 128 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 SLC6A15Q9H2J7 730 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 RHOJQ9H4E5 214 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 ZNF703Q9H7S9 590 aaPredicted RBP5.6□□□□□ -1.51
VPS25-204ENST00000589577 VIPAS39Q9H9C1 493 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 FBXO6Q9NRD1 293 aaPredicted RBP5.6□□□□□ -1.51
VPS25-204ENST00000589577 TMEM160Q9NX00 188 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 TUBA8Q9NY65 449 aaPredicted RBP5.6□□□□□ -1.51
VPS25-204ENST00000589577 MOCS1Q9NZB8 636 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 SENP1Q9P0U3 644 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 TRMT6Q9UJA5 497 aaKnown RBP5.6□□□□□ -1.51
VPS25-204ENST00000589577 ZNF180Q9UJW8 692 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 SLC39A10Q9ULF5 831 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 RUVBL2Q9Y230 463 aaKnown RBP5.6□□□□□ -1.51
VPS25-204ENST00000589577 NFS1Q9Y697 457 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 NINQ8N4C6 2090 aa5.6□□□□□ -1.51
VPS25-204ENST00000589577 IGKV3D-11A0A0A0MRZ8 115 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 TRBV11-1A0A0K0K1C0 115 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 FAM95CA0A1B0GW59 222 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 MBD3L3A6NE82 208 aaPredicted RBP5.59□□□□□ -1.51
VPS25-204ENST00000589577 ZNF860A6NHJ4 632 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 HAT1O14929 419 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 CASKO14936 926 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 ATP8B1O43520 1251 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 OR1I1O60431 355 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 ZNF354AO60765 605 aaPredicted RBP5.59□□□□□ -1.51
VPS25-204ENST00000589577 OR2J2O76002 312 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 C1orf105O95561 183 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 IL2RAP01589 272 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 RPN2P04844 631 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 PGRP06401 933 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 THBS1P07996 1170 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 ERGP11308 486 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 EZRP15311 586 aaKnown RBP5.59□□□□□ -1.51
VPS25-204ENST00000589577 H2AFXP16104 143 aaPredicted RBP5.59□□□□□ -1.51
VPS25-204ENST00000589577 STMN1P16949 149 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 CRYGSP22914 178 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 RPS3P23396 243 aaKnown RBP eCLIP5.59□□□□□ -1.512e-7■■■■■ 46
VPS25-204ENST00000589577 CTSSP25774 331 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 CRABP2P29373 138 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 TYK2P29597 1187 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 CMPK1P30085 196 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 FMO4P31512 558 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 CCKARP32238 428 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 OPRM1P35372 400 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 ACVR1BP36896 505 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 SOX3P41225 446 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 MC3RP41968 323 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 SERPINB8P50452 374 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 SSR4P51571 173 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 GPX6P59796 221 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 POU4F1Q01851 419 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 CRYZQ08257 329 aaKnown RBP5.59□□□□□ -1.51
VPS25-204ENST00000589577 HSPA14Q0VDF9 509 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 SLC10A1Q14973 349 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 ZNF750Q32MQ0 723 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 BEND6Q5SZJ8 279 aaPredicted RBP5.59□□□□□ -1.51
VPS25-204ENST00000589577 TEDDM1Q5T9Z0 273 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 NSUN5P2Q63ZY6 315 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 TMEM214Q6NUQ4 689 aaKnown RBP5.59□□□□□ -1.51
VPS25-204ENST00000589577 TTC23LQ6PF05 361 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 ADGRD1Q6QNK2 874 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 SUSD1Q6UWL2 747 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 PLXDC2Q6UX71 529 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 IL20RBQ6UXL0 311 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 C22orf34Q6ZV56 151 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 IL17RELQ6ZVW7 336 aa5.59□□□□□ -1.51
VPS25-204ENST00000589577 PLEKHM3Q6ZWE6 761 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms