RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 KRT87PA6NCN2 255 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 HEPACAM2A8MVW5 462 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 HNRNPCL2B2RXH8 293 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 HNRNPCL3B7ZW38 293 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 PRRT4C9JH25 899 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 J3QRK9 145 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 TLR4O00206 839 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 CCRL2O00421 344 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 SAP18O00422 153 aaKnown RBP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 PLPP1O14494 284 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 CASC3O15234 703 aaKnown RBP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 SPINT1O43278 529 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 SLC28A2O43868 658 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 GCM2O75603 506 aaPredicted RBP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 UGT2B17O75795 530 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 PCDH8O95206 1070 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 VIPP01282 170 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 APOA1P02647 267 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 OPN1SWP03999 348 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 PCCBP05166 539 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 BCHEP06276 602 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 EPHX1P07099 455 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 HNRNPCL4P0DMR1 293 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 NR2F1P10589 423 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 IMPDH2P12268 514 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 C5AR1P21730 350 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 ITGB8P26012 769 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 CMPK1P30085 196 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 CD6P30203 668 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 CSTF2P33240 577 aaKnown RBP eCLIP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 BSGP35613 385 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 AHRP35869 848 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 TGFBR2P37173 567 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 SSR2P43308 183 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 CCT3P49368 545 aaKnown RBP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 RAB28P51157 221 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 PCBP4P57723 403 aaKnown RBP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 VBP1P61758 197 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 STXBP1P61764 594 aaKnown RBP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 PRR5P85299 388 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 MC1RQ01726 317 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 RHAGQ02094 409 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 PRKCDQ05655 676 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 SGCGQ13326 291 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 IRF3Q14653 427 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 SLC9A5Q14940 896 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 OXA1LQ15070 435 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 NCF4Q15080 339 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 SF1Q15637 639 aaKnown RBP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 ADPRMQ3LIE5 342 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 ARMCX4Q5H9R4 360 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 TMEM201Q5SNT2 666 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 SLX4IPQ5VYV7 408 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 PLAG1Q6DJT9 500 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 OR4C11Q6IEV9 310 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 FRMPD2BQ6IN97 320 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 KIAA1161Q6NSJ0 714 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 CD300LDQ6UXZ3 194 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 C11orf96Q7Z7L8 435 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 MMAAQ8IVH4 418 aaKnown RBP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 ZNF547Q8IVP9 402 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 CYP4Z2PQ8N1L4 340 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 ZNF366Q8N895 744 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 FLCNQ8NFG4 579 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 OR8J1Q8NGP2 316 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 OR5AR1Q8NGP9 310 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 OR2L8Q8NGY9 312 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 NDNFQ8TB73 568 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 SNRNP27Q8WVK2 155 aaKnown RBP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 APH1BQ8WW43 257 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 SGCDQ92629 289 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 NXPE3Q969Y0 559 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 ZNF707Q96C28 371 aaPredicted RBP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 OTUB1Q96FW1 271 aaPredicted RBP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 TMEM19Q96HH6 336 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 DHRS1Q96LJ7 313 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 CEP19Q96LK0 163 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 ASB16Q96NS5 453 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 FERD3LQ96RJ6 166 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 CDCA3Q99618 268 aaPredicted RBP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 MND1Q9BWT6 205 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 TEX101Q9BY14 249 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 TTYH1Q9H313 450 aaPredicted RBP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 DSN1Q9H410 356 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 MTG2Q9H4K7 406 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 WDR26Q9H7D7 661 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 SYNDIG1Q9H7V2 258 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 CXorf36Q9H7Y0 433 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 EVA1AQ9H8M9 152 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 NMNAT1Q9HAN9 279 aaPredicted RBP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 C3orf14Q9HBI5 128 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 CPNE5Q9HCH3 593 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 BCL2L10Q9HD36 194 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 LTB4R2Q9NPC1 389 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 KRCC1Q9NPI7 259 aaPredicted RBP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 GPATCH2Q9NW75 528 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 LYARQ9NX58 379 aaKnown RBP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 KLHL28Q9NXS3 571 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 FTSJ1Q9UET6 329 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms