RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 LIMS1P48059 325 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 IDH2P48735 452 aaKnown RBP13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 CCR8P51685 355 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 ARFIP1P53367 373 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 MAPK12P53778 367 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 MANFP55145 182 aaKnown RBP13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 MLLT10P55197 1068 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 SNRPGP62308 76 aaKnown RBP13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 COX10Q12887 443 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 IRF3Q14653 427 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 MLC1Q15049 377 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 SMN1Q16637 294 aaKnown RBP13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 ST3GAL2Q16842 350 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 HNRNPA1L2Q32P51 320 aaKnown RBP13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 CCSMST1Q4G0I0 132 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 FNDC3BQ53EP0 1204 aaKnown RBP13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 ZNF385BQ569K4 471 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 CATSPEREQ5SY80 951 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 FAM46CQ5VWP2 391 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 RNLSQ5VYX0 342 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 BHLHB9Q6PI77 547 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 PTCHD4Q6ZW05 846 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 GALNT10Q86SR1 603 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 AMZ2Q86W34 360 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 TBC1D19Q8N5T2 526 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 NAT16Q8N8M0 369 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 DTWD2Q8NBA8 298 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 SMPDL3AQ92484 453 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 RGMAQ96B86 450 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 TCEAL4Q96EI5 215 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 FAM129BQ96TA1 746 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 WRAP53Q9BUR4 548 aaKnown RBP13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 UCK2Q9BZX2 261 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 OR51B5Q9H339 312 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 WASH6PQ9NQA3 447 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 ACER3Q9NUN7 267 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 DLL3Q9NYJ7 618 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 KCND3Q9UK17 655 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 RAB23Q9ULC3 237 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 EXO1Q9UQ84 846 aaKnown RBP13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 ERVK-11Q9UQG0 969 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 MAP4K5Q9Y4K4 846 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 WNT6Q9Y6F9 365 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 MN1Q10571 1320 aaPredicted RBP13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 AGAP5A6NIR3 686 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 SNTNA6NMZ2 147 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 ZAR1LA6NP61 321 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 ZSCAN9O15535 394 aaPredicted RBP13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 KDM1AO60341 852 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 KCNJ13O60928 360 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 PAPLNO95428 1278 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 VIPP01282 170 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 APOA1P02647 267 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 LCKP06239 509 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 IL3P08700 152 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 BMP4P12644 408 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 OSMP13725 252 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 GABRB1P18505 474 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 NR4A1P22736 598 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 CRYBA2P53672 197 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 UGT2B15P54855 530 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 RPS3AP61247 264 aaKnown RBP13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 NCS1P62166 190 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 LSM3P62310 102 aaKnown RBP13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 RHAGQ02094 409 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 ST3GAL4Q11206 333 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 NCF4Q15080 339 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 SLC5A12Q1EHB4 618 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 RSPO4Q2I0M5 234 aaPredicted RBP13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 SPDYE7PQ495Y7 208 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 ARMCX4Q5H9R4 360 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 PRSS36Q5K4E3 855 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 COX20Q5RI15 118 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 KHDRBS2Q5VWX1 349 aaKnown RBP13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 PLPP4Q5VZY2 271 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 SAXO2Q658L1 398 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 NUDT13Q86X67 352 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 CCDC71Q8IV32 467 aaPredicted RBP13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 WDR48Q8TAF3 677 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 MOAP1Q96BY2 351 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 FAIM2Q9BWQ8 316 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 RAB11FIP5Q9BXF6 653 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 TRIM45Q9H8W5 580 aaPredicted RBP13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 HCFC1R1Q9NWW0 138 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 DEC1Q9P2X7 70 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 ACSL5Q9ULC5 683 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 ASF1AQ9Y294 204 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 RPL36Q9Y3U8 105 aaKnown RBP13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 R4GN57 208 aa13.37□□□□□ -0.27
NEDD4L-223ENST00000588516 KMT2BQ9UMN6 2715 aaPredicted RBP13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 CEP250Q9BV73 2442 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 SPTBN2O15020 2390 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 MYOFQ9NZM1 2061 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 KRBA1A5PL33 1030 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 TMEM229AB2RXF0 380 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 CCRL2O00421 344 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 STK25O00506 426 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 UPK1BO75841 260 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 SLITRK5O94991 958 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 PTTG1O95997 202 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms