RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 MUC6Q6W4X9 2439 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 MYOCOSA0A1B0GUC4 107 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 B4E171 279 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 NME4O00746 187 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 TM4SF5O14894 197 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 POLR1CO15160 346 aaPredicted RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 FGF17O60258 216 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 LDB3O75112 727 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 ERN1O75460 977 aaKnown RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 PDE5AO76074 875 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 SORBS2O94875 1100 aaKnown RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 ANP32DO95626 131 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 NPPAP01160 153 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 NTRK1P04629 796 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 FTH1P19P0C7X4 201 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 RNH1P13489 461 aaKnown RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 DDX5P17844 614 aaKnown RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 CSRP1P21291 193 aaKnown RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 FBLP22087 321 aaKnown RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 TLX1P31314 330 aaPredicted RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 PGM1P36871 562 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 FEN1P39748 380 aaKnown RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 TSPAN7P41732 249 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 TRPC1P48995 793 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 CDK9P50750 372 aaKnown RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 SLC7A2P52569 658 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 MTPNP58546 118 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 HBA1P69905 142 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 DMTNQ08495 405 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 DSG2Q14126 1118 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 IL11RAQ14626 422 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 CEBPEQ15744 281 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 RUNDC3AQ59EK9 446 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 RABL3Q5HYI8 236 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 ARHGAP40Q5TG30 622 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 NANOGP8Q6NSW7 305 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 PRMT9Q6P2P2 845 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 COX15Q7KZN9 410 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 ZNF551Q7Z340 670 aaPredicted RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 BPHLQ86WA6 291 aaPredicted RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 SLC15A3Q8IY34 581 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 VPS37AQ8NEZ2 397 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 GOT1L1Q8NHS2 421 aaPredicted RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 SUN3Q8TAQ9 357 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 OR5P2Q8WZ92 322 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 COL26A1Q96A83 441 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 TMEM125Q96AQ2 219 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 ANKRD9Q96BM1 317 aaPredicted RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 CLIP3Q96DZ5 547 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 AURKBQ96GD4 344 aaPredicted RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 ZNF681Q96N22 645 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 AMDHD1Q96NU7 426 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 ANKRD27Q96NW4 1050 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 GBP5Q96PP8 586 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 CDRT15Q96T59 188 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 CGREF1Q99674 301 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 CMKLR1Q99788 373 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 HOPXQ9BPY8 73 aaPredicted RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 CPPED1Q9BRF8 314 aaPredicted RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 STRADBQ9C0K7 418 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 SLC7A5P2Q9GIP4 190 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 GLIPR2Q9H4G4 154 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 IKZF5Q9H5V7 419 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 NANOGQ9H9S0 305 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 CLK4Q9HAZ1 481 aaKnown RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 ZNF304Q9HCX3 659 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 FBXO8Q9NRD0 319 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 SLC22A11Q9NSA0 550 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 CMTM6Q9NX76 183 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 TMEM181Q9P2C4 612 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 PRPF19Q9UMS4 504 aaKnown RBP10.64□□□□□ -0.71
VMP1-207ENST00000588131 CDC14AQ9UNH5 594 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 ENTPD4Q9Y227 616 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 PCDHB3Q9Y5E6 796 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 SPTBP11277 2137 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 NUP210LQ5VU65 1888 aa10.64□□□□□ -0.71
VMP1-207ENST00000588131 A0A1W2PNU3 283 aaPredicted RBP10.63□□□□□ -0.71
VMP1-207ENST00000588131 OR2W5A6NFC9 320 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 CFAP73A6NFT4 308 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 TMX2-CTNND1H3BSU7 103 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 TGFBR3LH3BV60 316 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 B4GALT2O60909 372 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 JRKO75564 520 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 CDC123O75794 336 aaPredicted RBP10.63□□□□□ -0.71
VMP1-207ENST00000588131 FHP07954 510 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 ZCCHC18P0CG32 403 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 CSNK2A2P19784 350 aaPredicted RBP10.63□□□□□ -0.71
VMP1-207ENST00000588131 NTSP30990 170 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 XCR1P46094 333 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 NCBP2P52298 156 aaKnown RBP eCLIP10.63□□□□□ -0.719e-8■□□□□ 10.2
VMP1-207ENST00000588131 MANFP55145 182 aaKnown RBP10.63□□□□□ -0.71
VMP1-207ENST00000588131 BTG2P78543 158 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 FOLH1Q04609 750 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 LRRC74AQ0VAA2 488 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 HSPB3Q12988 150 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 CEACAM7Q14002 265 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 MLC1Q15049 377 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.63□□□□□ -0.71
VMP1-207ENST00000588131 ZNF385CQ66K41 422 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms