RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 SERPINB5P36952 375 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 GSTM5P46439 218 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 MLF1P58340 268 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 PLIN5Q00G26 463 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 FOLH1Q04609 750 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 ACSM2AQ08AH3 577 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 PCLAFQ15004 111 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 TNFAIP8L3Q5GJ75 292 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 ACSM2BQ68CK6 577 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 OR52E8Q6IFG1 317 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 TRIM46Q7Z4K8 759 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 CUZD1Q86UP6 607 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 CRLF3Q8IUI8 442 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 ST13P4Q8IZP2 240 aaPredicted RBP9.43□□□□□ -0.9
TPM4-207ENST00000588032 BEST3Q8N1M1 668 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 CATSPER1Q8NEC5 780 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 OR5L2Q8NGL0 311 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 OR1N1Q8NGS0 311 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 OR8K3Q8NH51 312 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 PTPMT1Q8WUK0 201 aaPredicted RBP9.43□□□□□ -0.9
TPM4-207ENST00000588032 MIB2Q96AX9 1013 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 METTL2AQ96IZ6 378 aaKnown RBP9.43□□□□□ -0.9
TPM4-207ENST00000588032 ZIM3Q96PE6 472 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 UTP23Q9BRU9 249 aaKnown RBP9.43□□□□□ -0.9
TPM4-207ENST00000588032 FAIM2Q9BWQ8 316 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 GATA5Q9BWX5 397 aaPredicted RBP9.43□□□□□ -0.9
TPM4-207ENST00000588032 ACPTQ9BZG2 426 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.43□□□□□ -0.9
TPM4-207ENST00000588032 STMN4Q9H169 189 aaPredicted RBP9.43□□□□□ -0.9
TPM4-207ENST00000588032 CDCP1Q9H5V8 836 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 RRAGDQ9NQL2 400 aaPredicted RBP9.43□□□□□ -0.9
TPM4-207ENST00000588032 AGPAT4Q9NRZ5 378 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.43□□□□□ -0.9
TPM4-207ENST00000588032 SIRT5Q9NXA8 310 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 PLA2G3Q9NZ20 509 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 SLC17A7Q9P2U7 560 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 MCM8Q9UJA3 840 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 TIMM22Q9Y584 194 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 PCDHGB6Q9Y5F9 930 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 PCDHGA10Q9Y5H3 936 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 ACTL7BQ9Y614 415 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 COPG1Q9Y678 874 aaKnown RBP9.43□□□□□ -0.9
TPM4-207ENST00000588032 NBEAQ8NFP9 2946 aa9.43□□□□□ -0.9
TPM4-207ENST00000588032 TNRC6AQ8NDV7 1962 aaKnown RBP9.43□□□□□ -0.9
TPM4-207ENST00000588032 TRBV11-1A0A0K0K1C0 115 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 GABRR3A8MPY1 467 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 C17orf105B2RV13 164 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 TM9SF1O15321 606 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 OR10H2O60403 315 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 PRAMEF2O60811 474 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 VPS4BO75351 444 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 CHEK2O96017 543 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 GBAP04062 536 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 FGF4P08620 206 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 SLC35E2P0CK97 266 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 TRHRP34981 398 aaPredicted RBP9.42□□□□□ -0.9
TPM4-207ENST00000588032 CD96P40200 585 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 KCNC4Q03721 635 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 COLEC12Q5KU26 742 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 TCHHL1Q5QJ38 904 aaPredicted RBP9.42□□□□□ -0.9
TPM4-207ENST00000588032 BEND6Q5SZJ8 279 aaPredicted RBP9.42□□□□□ -0.9
TPM4-207ENST00000588032 NDUFAF5Q5TEU4 345 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 GALNT18Q6P9A2 607 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 HSDL2Q6YN16 418 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 RNF165Q6ZSG1 346 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 EXOC3L1Q86VI1 746 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 OR4N5Q8IXE1 308 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 KIF2BQ8N4N8 673 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 CISD2Q8N5K1 135 aaKnown RBP9.42□□□□□ -0.9
TPM4-207ENST00000588032 C1orf52Q8N6N3 182 aaKnown RBP9.42□□□□□ -0.9
TPM4-207ENST00000588032 GALNT11Q8NCW6 608 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 OR4K14Q8NGD5 310 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 FAM76AQ8TAV0 307 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 NCLNQ969V3 563 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 TM4SF18Q96CE8 201 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 SNRNP40Q96DI7 357 aaKnown RBP9.42□□□□□ -0.9
TPM4-207ENST00000588032 HBEGFQ99075 208 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 BARD1Q99728 777 aaKnown RBP9.42□□□□□ -0.9
TPM4-207ENST00000588032 SHCBP1LQ9BZQ2 653 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 TRIM4Q9C037 500 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 CENPHQ9H3R5 247 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 TRIM45Q9H8W5 580 aaPredicted RBP9.42□□□□□ -0.9
TPM4-207ENST00000588032 LUZP4Q9P127 313 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 COPS7AQ9UBW8 275 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 VPS4AQ9UN37 437 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 WBP11Q9Y2W2 641 aaKnown RBP9.42□□□□□ -0.9
TPM4-207ENST00000588032 PCDHA9Q9Y5H5 950 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 CSAG2Q9Y5P2 127 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 ATRXP46100 2492 aa9.42□□□□□ -0.9
TPM4-207ENST00000588032 GNG14A0A1W2PPG7 69 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 GOLGA6L10A6NI86 522 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 GLOD5A6NK44 160 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 NPIPB8E9PQR5 432 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 SLC28A1O00337 649 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 AZIN1O14977 448 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 PGRMC2O15173 223 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 BIRC5O15392 142 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 RSL1D1O76021 490 aaKnown RBP9.41□□□□□ -0.9
TPM4-207ENST00000588032 SNUPNO95149 360 aaKnown RBP9.41□□□□□ -0.9
TPM4-207ENST00000588032 ZWINTO95229 277 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms