RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 TMED5Q9Y3A6 229 aa13.2□□□□□ -0.3
TPM4-205ENST00000586833 ZNF780BQ9Y6R6 833 aa13.2□□□□□ -0.3
TPM4-205ENST00000586833 DSPP15924 2871 aaKnown RBP13.2□□□□□ -0.3
TPM4-205ENST00000586833 SNRNP200O75643 2136 aaKnown RBP13.19□□□□□ -0.3
TPM4-205ENST00000586833 ZFHX4Q86UP3 3567 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 A0A1W2PR48 441 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 HMGB1P1B2RPK0 211 aaPredicted RBP13.19□□□□□ -0.3
TPM4-205ENST00000586833 C17orf105B2RV13 164 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 FCHO1O14526 889 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 LDB3O75112 727 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 SEC22BO75396 215 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 ZFAND5O76080 213 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 ANXA4P09525 319 aaPredicted RBP13.19□□□□□ -0.3
TPM4-205ENST00000586833 DHRS4L1P0CG22 281 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 SLC35E2P0CK97 266 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 ITGAMP11215 1152 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 SERPINB3P29508 390 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 GALNSP34059 522 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 HNRNPFP52597 415 aaKnown RBP13.19□□□□□ -0.3
TPM4-205ENST00000586833 EFNA3P52797 238 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 FOXA1P55317 472 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 ABCE1P61221 599 aaKnown RBP13.19□□□□□ -0.3
TPM4-205ENST00000586833 FOLH1Q04609 750 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 Q0VFX4 171 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 STX3Q13277 289 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 TLR1Q15399 786 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 NR6A1Q15406 480 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 C18orf63Q68DL7 685 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 CLEC6AQ6EIG7 209 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 GALNT18Q6P9A2 607 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 SCIMPQ6UWF3 145 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 LINC00696Q6ZRV3 163 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 PTRH1Q86Y79 214 aaKnown RBP13.19□□□□□ -0.3
TPM4-205ENST00000586833 ZNF843Q8N446 348 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 SIRT6Q8N6T7 355 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 TMEM52Q8NDY8 209 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 OR5L2Q8NGL0 311 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 TWIST2Q8WVJ9 160 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 PNPLA2Q96AD5 504 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 ATP6V1G3Q96LB4 118 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 PPP3R2Q96LZ3 170 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 RNF32Q9H0A6 362 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 LRTM1Q9HBL6 345 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 C1orf109Q9NX04 203 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 STMN3Q9NZ72 180 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 PCDHA9Q9Y5H5 950 aa13.19□□□□□ -0.3
TPM4-205ENST00000586833 HEATR5BQ9P2D3 2071 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 FGF17O60258 216 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 CHRNGP07510 517 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 PRPH2P23942 346 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 SOX11P35716 441 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 SLC1A6P48664 564 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 ALDH9A1P49189 494 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 IGLV3-21P80748 117 aaPredicted RBP13.18□□□□□ -0.3
TPM4-205ENST00000586833 ZNF763Q0D2J5 394 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 IGFL2Q6UWQ7 119 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 HSDL2Q6YN16 418 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 IKBIPQ70UQ0 350 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 PRICKLE2Q7Z3G6 844 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 ZNF605Q86T29 641 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 DNAJB14Q8TBM8 379 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 MGARPQ8TDB4 240 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 ELP5Q8TE02 316 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 ANKRD9Q96BM1 317 aaPredicted RBP13.18□□□□□ -0.3
TPM4-205ENST00000586833 TM4SF18Q96CE8 201 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 APIPQ96GX9 242 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 MESP1Q9BRJ9 268 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.18□□□□□ -0.33e-9■■■□□ 17.9
TPM4-205ENST00000586833 MIEF1Q9NQG6 463 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 PPIEQ9UNP9 301 aaKnown RBP13.18□□□□□ -0.3
TPM4-205ENST00000586833 ENTPD4Q9Y227 616 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 B3GNT3Q9Y2A9 372 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 RAP2CQ9Y3L5 183 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 CFAP47Q6ZTR5 3102 aa13.18□□□□□ -0.3
TPM4-205ENST00000586833 TRBV11-1A0A0K0K1C0 115 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 NPIPB8E9PQR5 432 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 MASP2O00187 686 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 PDGFAP04085 211 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 PRB1P04280 392 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 SPTBP11277 2137 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 CHN1P15882 459 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 PORP16435 677 aaPredicted RBP13.17□□□□□ -0.3
TPM4-205ENST00000586833 CSNK2A2P19784 350 aaPredicted RBP13.17□□□□□ -0.3
TPM4-205ENST00000586833 NR1D1P20393 614 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 BGNP21810 368 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 XKP51811 444 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 ID2Q02363 134 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 MAD2L1Q13257 205 aaPredicted RBP13.17□□□□□ -0.3
TPM4-205ENST00000586833 ATP6AP1LQ52LC2 224 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 ACER2Q5QJU3 275 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 SLC48A1Q6P1K1 146 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 RPS19BP1Q86WX3 136 aaKnown RBP13.17□□□□□ -0.3
TPM4-205ENST00000586833 OR4N5Q8IXE1 308 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 SHISA5Q8N114 240 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 OR1N1Q8NGS0 311 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 OR6Y1Q8NGX8 325 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 OR8K3Q8NH51 312 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 CDC26Q8NHZ8 85 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 AGR3Q8TD06 166 aa13.17□□□□□ -0.3
TPM4-205ENST00000586833 HAS2Q92819 552 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms