RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 OR5L2Q8NGL0 311 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 GABPB2Q8TAK5 448 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-225ENST00000586385 NEIL3Q8TAT5 605 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 NUBPLQ8TB37 319 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 FAM222BQ8WU58 562 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 RNASE6Q93091 150 aaKnown RBP10.93□□□□□ -0.66
BRCA1-225ENST00000586385 SPACA9Q96E40 222 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-225ENST00000586385 MS4A8Q9BY19 250 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 PITHD1Q9GZP4 211 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-225ENST00000586385 PLEKHF2Q9H8W4 249 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 ZFP64Q9NPA5 681 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 ACKR4Q9NPB9 350 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 PPANQ9NQ55 473 aaKnown RBP10.93□□□□□ -0.66
BRCA1-225ENST00000586385 GPRC5BQ9NZH0 403 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 CTNNAL1Q9UBT7 734 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 B4GALT7Q9UBV7 327 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 CNOT11Q9UKZ1 510 aaKnown RBP10.93□□□□□ -0.66
BRCA1-225ENST00000586385 NCKAP5O14513 1909 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 A0A088AWK7 358 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 SYNDIG1LA6NDD5 238 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 ANKDD1BA6NHY2 528 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 WASHC1A8K0Z3 465 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 HSPB2A8KAH6 182 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 PIAS1O75925 651 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 SCELO95171 688 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 EPPINO95925 133 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 CLPSP04118 112 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 DRD2P14416 443 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 TNNI3P19429 210 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 ZNF10P21506 573 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-225ENST00000586385 BMP5P22003 454 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 HOXC12P31275 282 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 GMPRP36959 345 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 KCNC1P48547 511 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 HSPA7P48741 367 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 TRPC1P48995 793 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 ASCL1P50553 236 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 ZNF136P52737 540 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 LTBQ06643 244 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 CRYZQ08257 329 aaKnown RBP10.92□□□□□ -0.66
BRCA1-225ENST00000586385 SERTAD2Q14140 314 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 E2F2Q14209 437 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 FRG1Q14331 258 aaKnown RBP10.92□□□□□ -0.66
BRCA1-225ENST00000586385 FASTKD3Q14CZ7 662 aaKnown RBP10.92□□□□□ -0.66
BRCA1-225ENST00000586385 HSPB2Q16082 182 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 SLC22A10Q63ZE4 541 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 FBXW8Q8N3Y1 598 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 ACTRT1Q8TDG2 376 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 GRK7Q8WTQ7 553 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 ZNF473Q8WTR7 871 aaKnown RBP10.92□□□□□ -0.66
BRCA1-225ENST00000586385 KIAA1191Q96A73 305 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 PPWD1Q96BP3 646 aaKnown RBP10.92□□□□□ -0.66
BRCA1-225ENST00000586385 RUNDC3BQ96NL0 473 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 KCNC2Q96PR1 638 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 SORBS1Q9BX66 1292 aaKnown RBP10.92□□□□□ -0.66
BRCA1-225ENST00000586385 DDX47Q9H0S4 455 aaKnown RBP10.92□□□□□ -0.66
BRCA1-225ENST00000586385 EXO5Q9H790 373 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 SMYD2Q9NRG4 433 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 DNAJC11Q9NVH1 559 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 MOCS1Q9NZB8 636 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 ASIC3Q9UHC3 531 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 PPP2R2CQ9Y2T4 447 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 PCDHGB3Q9Y5G1 929 aa10.92□□□□□ -0.66
BRCA1-225ENST00000586385 FAM47E-STBD1D6RA91 191 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 SH3BGRLO75368 114 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 TRIM3O75382 744 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-225ENST00000586385 PRKRAO75569 313 aaKnown RBP10.91□□□□□ -0.66
BRCA1-225ENST00000586385 FBXO45P0C2W1 286 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 HIST1H1TP22492 207 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-225ENST00000586385 TACR1P25103 407 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 STT3AP46977 705 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 DGKQP52824 942 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 MGAT5Q09328 741 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 DUSP8Q13202 625 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 PPP1R7Q15435 360 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 OR4D1Q15615 310 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 DEFB113Q30KQ7 82 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 FNDC7Q5VTL7 733 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 BICRALQ6AI39 1079 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 TMEM64Q6YI46 380 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 FRA10AC1Q70Z53 315 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 CAMKMTQ7Z624 323 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 RNF175Q8N4F7 328 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 NTNG2Q96CW9 530 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 PTCD3Q96EY7 689 aaKnown RBP10.91□□□□□ -0.66
BRCA1-225ENST00000586385 OSBPL9Q96SU4 736 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 TBCDQ9BTW9 1192 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 DERL2Q9GZP9 239 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 COPS7BQ9H9Q2 264 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-225ENST00000586385 QPCTLQ9NXS2 382 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 PTBP2Q9UKA9 531 aaKnown RBP10.91□□□□□ -0.66
BRCA1-225ENST00000586385 JRKLQ9Y4A0 524 aa10.91□□□□□ -0.66
BRCA1-225ENST00000586385 KIAA1549Q9HCM3 1950 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 VPS13CQ709C8 3753 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 NSD1Q96L73 2696 aaPredicted RBP10.9□□□□□ -0.66
BRCA1-225ENST00000586385 SAP18O00422 153 aaKnown RBP10.9□□□□□ -0.66
BRCA1-225ENST00000586385 C1QAP02745 245 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 RAF1P04049 648 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 TIMP3P35625 211 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 CASP2P42575 452 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms