RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 KRT78Q8N1N4 520 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 SNX31Q8N9S9 440 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 FBXO36Q8NEA4 188 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 ANKRD7Q92527 254 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 DAZLQ92904 295 aaKnown RBP10.73□□□□□ -0.69
LIG3-207ENST00000586119 UCN3Q969E3 161 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 GPATCH1Q9BRR8 931 aaKnown RBP10.73□□□□□ -0.69
LIG3-207ENST00000586119 MCMBPQ9BTE3 642 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 LDAHQ9H6V9 325 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 DNAJC11Q9NVH1 559 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 MOCS1Q9NZB8 636 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 DMGDHQ9UI17 866 aaKnown RBP10.73□□□□□ -0.69
LIG3-207ENST00000586119 ACAD8Q9UKU7 415 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 E7ESA3 106 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 AQP7O14520 342 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 BCKDKO14874 412 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 FGF17O60258 216 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 CTAG2O75638 210 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 ZWINTO95229 277 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 TGFB1P01137 390 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 ATP5A1P25705 553 aaKnown RBP10.72□□□□□ -0.69
LIG3-207ENST00000586119 MAN2A2P49641 1150 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 PLTPP55058 493 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 PDIA2Q13087 525 aaKnown RBP10.72□□□□□ -0.69
LIG3-207ENST00000586119 ZNF791Q3KP31 576 aaPredicted RBP10.72□□□□□ -0.69
LIG3-207ENST00000586119 TEX35Q5T0J7 233 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 C1orf185Q5T7R7 199 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 NDUFAF5Q5TEU4 345 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 ARSKQ6UWY0 536 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 ZDHHC24Q6UX98 284 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 RGS9BPQ6ZS82 235 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 GK5Q6ZS86 529 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 WDR53Q7Z5U6 358 aaPredicted RBP10.72□□□□□ -0.69
LIG3-207ENST00000586119 ADAMTSL2Q86TH1 951 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 C9orf40Q8IXQ3 194 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 ACOT4Q8N9L9 421 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 TTLQ8NG68 377 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 OR14A16Q8NHC5 309 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 ZNF473Q8WTR7 871 aaKnown RBP10.72□□□□□ -0.69
LIG3-207ENST00000586119 SENP5Q96HI0 755 aaPredicted RBP10.72□□□□□ -0.69
LIG3-207ENST00000586119 VPS39Q96JC1 886 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 SLC6A15Q9H2J7 730 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 EXO5Q9H790 373 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 COPS7BQ9H9Q2 264 aaPredicted RBP10.72□□□□□ -0.69
LIG3-207ENST00000586119 SH2D2AQ9NP31 389 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 SACM1LQ9NTJ5 587 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 WWOXQ9NZC7 414 aa10.72□□□□□ -0.69
LIG3-207ENST00000586119 MTRF1LQ9UGC7 380 aaKnown RBP10.72□□□□□ -0.69
LIG3-207ENST00000586119 MRPS33Q9Y291 106 aaKnown RBP10.72□□□□□ -0.69
LIG3-207ENST00000586119 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.72□□□□□ -0.69
LIG3-207ENST00000586119 TRGV5A0A0B4J1U4 118 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 OR14I1A6ND48 311 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 CCNT2O60583 730 aaKnown RBP10.71□□□□□ -0.69
LIG3-207ENST00000586119 P04436 131 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 CCDC166P0CW27 439 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 CD1DP15813 335 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 SSTR1P30872 391 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 GGT5P36269 586 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 MSH2P43246 934 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 TRPC1P48995 793 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 CHIT1Q13231 466 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 EFTUD2Q15029 972 aaKnown RBP eCLIP10.71□□□□□ -0.695e-6■■■■□ 20.8
LIG3-207ENST00000586119 CEBPEQ15744 281 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 HYAL4Q2M3T9 481 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 C18orf63Q68DL7 685 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 OPN5Q6U736 354 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 TMEM64Q6YI46 380 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 GPSM1Q86YR5 675 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 CLYBLQ8N0X4 340 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 GOLM1Q8NBJ4 401 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 RELL2Q8NC24 303 aaPredicted RBP10.71□□□□□ -0.69
LIG3-207ENST00000586119 NAXEQ8NCW5 288 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 OR8K3Q8NH51 312 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 FBXO25Q8TCJ0 367 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.71□□□□□ -0.69
LIG3-207ENST00000586119 EXT2Q93063 718 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 WDR34Q96EX3 536 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 PTCD3Q96EY7 689 aaKnown RBP10.71□□□□□ -0.69
LIG3-207ENST00000586119 MS4A8Q9BY19 250 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 POLDIP3Q9BY77 421 aaKnown RBP10.71□□□□□ -0.69
LIG3-207ENST00000586119 DERL2Q9GZP9 239 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 OR51B5Q9H339 312 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 RHOJQ9H4E5 214 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 LYRM4Q9HD34 91 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 RRAGDQ9NQL2 400 aaPredicted RBP10.71□□□□□ -0.69
LIG3-207ENST00000586119 ZDHHC18Q9NUE0 388 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 GPRC5BQ9NZH0 403 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 CRIM1Q9NZV1 1036 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 PTBP2Q9UKA9 531 aaKnown RBP10.71□□□□□ -0.69
LIG3-207ENST00000586119 PLEKHA6Q9Y2H5 1048 aa10.71□□□□□ -0.69
LIG3-207ENST00000586119 A0A088AWK7 358 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 A0A1W2PS29 197 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 ESYT3A0FGR9 886 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 LRRC3CA6NJW4 275 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 FIGNL2A6NMB9 653 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 PROM1O43490 865 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 SUSD5O60279 629 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 STK16O75716 305 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 IGKV3-11P04433 115 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 TUBBP07437 444 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms