RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 TAPBPO15533 448 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 ITM2AO43736 263 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 EDF1O60869 148 aaKnown RBP19.12■□□□□ 0.65
SRSF1-206ENST00000583741 LYPLA1O75608 230 aaPredicted RBP19.12■□□□□ 0.65
SRSF1-206ENST00000583741 HSPA4LO95757 839 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 B3GALT4O96024 378 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 FHP07954 510 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 SLC35G6P0C7Q6 338 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 CDH1P12830 882 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 SERPINB5P36952 375 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 NAA20P61599 178 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 OLR1P78380 273 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 OCRLQ01968 901 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 PCBP2Q15366 365 aaKnown RBP eCLIP19.12■□□□□ 0.658e-10■■□□□ 12.9
SRSF1-206ENST00000583741 C18orf21Q32NC0 220 aaPredicted RBP19.12■□□□□ 0.65
SRSF1-206ENST00000583741 FRMD7Q6ZUT3 714 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 C17orf64Q86WR6 236 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 MARVELD2Q8N4S9 558 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 AFAP1L2Q8N4X5 818 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 ZNF740Q8NDX6 193 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 ATL1Q8WXF7 558 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 C7orf26Q96N11 449 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 TMEM79Q9BSE2 394 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 C20orf27Q9GZN8 174 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 PCBD2Q9H0N5 130 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 GSTO2Q9H4Y5 243 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 ZNF395Q9H8N7 513 aaPredicted RBP19.12■□□□□ 0.65
SRSF1-206ENST00000583741 PSD3Q9NYI0 1048 aa19.12■□□□□ 0.65
SRSF1-206ENST00000583741 NIPBLQ6KC79 2804 aaeCLIP19.12■□□□□ 0.65
SRSF1-206ENST00000583741 IL10P22301 178 aa19.11■□□□□ 0.65
SRSF1-206ENST00000583741 ARRB2P32121 409 aa19.11■□□□□ 0.65
SRSF1-206ENST00000583741 HSPA7P48741 367 aa19.11■□□□□ 0.65
SRSF1-206ENST00000583741 CYB561P49447 251 aa19.11■□□□□ 0.65
SRSF1-206ENST00000583741 AGTRAPQ6RW13 159 aa19.11■□□□□ 0.65
SRSF1-206ENST00000583741 RPS27LQ71UM5 84 aaKnown RBP19.11■□□□□ 0.65
SRSF1-206ENST00000583741 MFSD9Q8NBP5 474 aa19.11■□□□□ 0.65
SRSF1-206ENST00000583741 TBC1D20Q96BZ9 403 aa19.11■□□□□ 0.65
SRSF1-206ENST00000583741 TRMOQ9BU70 441 aa19.11■□□□□ 0.65
SRSF1-206ENST00000583741 CD244Q9BZW8 370 aa19.11■□□□□ 0.65
SRSF1-206ENST00000583741 NSRP1Q9H0G5 558 aaKnown RBP19.11■□□□□ 0.65
SRSF1-206ENST00000583741 TRIM45Q9H8W5 580 aaPredicted RBP19.11■□□□□ 0.65
SRSF1-206ENST00000583741 PCTPQ9UKL6 214 aa19.11■□□□□ 0.65
SRSF1-206ENST00000583741 HRH3Q9Y5N1 445 aa19.11■□□□□ 0.65
SRSF1-206ENST00000583741 GALR3O60755 368 aaPredicted RBP19.1■□□□□ 0.65
SRSF1-206ENST00000583741 GGT5P36269 586 aa19.1■□□□□ 0.65
SRSF1-206ENST00000583741 RFC3P40938 356 aa19.1■□□□□ 0.65
SRSF1-206ENST00000583741 MEF2AQ02078 507 aaPredicted RBP19.1■□□□□ 0.65
SRSF1-206ENST00000583741 NAE1Q13564 534 aa19.1■□□□□ 0.65
SRSF1-206ENST00000583741 HERC3Q15034 1050 aa19.1■□□□□ 0.65
SRSF1-206ENST00000583741 ARL13AQ5H913 290 aaPredicted RBP19.1■□□□□ 0.65
SRSF1-206ENST00000583741 METTL2BQ6P1Q9 378 aaKnown RBP19.1■□□□□ 0.65
SRSF1-206ENST00000583741 ZNF483Q8TF39 744 aaPredicted RBP19.1■□□□□ 0.65
SRSF1-206ENST00000583741 SORT1Q99523 831 aa19.1■□□□□ 0.65
SRSF1-206ENST00000583741 SGPP1Q9BX95 441 aa19.1■□□□□ 0.65
SRSF1-206ENST00000583741 FAM107BQ9H098 131 aa19.1■□□□□ 0.65
SRSF1-206ENST00000583741 COQ3Q9NZJ6 369 aa19.1■□□□□ 0.65
SRSF1-206ENST00000583741 OPTCQ9UBM4 332 aa19.1■□□□□ 0.65
SRSF1-206ENST00000583741 ZNF407Q9C0G0 2248 aa19.1■□□□□ 0.65
SRSF1-206ENST00000583741 NDUFS4O43181 175 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 CHST10O43529 356 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 CCNT2O60583 730 aaKnown RBP19.09■□□□□ 0.65
SRSF1-206ENST00000583741 B4GALT2O60909 372 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 STK16O75716 305 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 SNUPNO95149 360 aaKnown RBP19.09■□□□□ 0.65
SRSF1-206ENST00000583741 CHRNGP07510 517 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 NPPBP16860 134 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 IGFBP2P18065 325 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 CDH13P55290 713 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 MLF1P58340 268 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 CLCQ05315 142 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 DEFB134Q4QY38 66 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 CPLX4Q7Z7G2 160 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 CD163Q86VB7 1156 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 EID3Q8N140 333 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 NSUN5Q96P11 429 aaKnown RBP19.09■□□□□ 0.65
SRSF1-206ENST00000583741 RABEP2Q9H5N1 569 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 EML4Q9HC35 981 aaKnown RBP19.09■□□□□ 0.65
SRSF1-206ENST00000583741 NPDC1Q9NQX5 325 aaPredicted RBP19.09■□□□□ 0.65
SRSF1-206ENST00000583741 A0A1B0GTH9 108 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 CDK2AP1O14519 115 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 TPOP07202 933 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 DRD4P21917 467 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 TRHRP34981 398 aaPredicted RBP19.09■□□□□ 0.65
SRSF1-206ENST00000583741 PTGS2P35354 604 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 GRK3P35626 688 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 GDF5P43026 501 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 SLC6A12P48065 614 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 MEOX1P50221 254 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 HLCSP50747 726 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 BTG2P78543 158 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 GALNT1Q10472 559 aaPredicted RBP19.09■□□□□ 0.65
SRSF1-206ENST00000583741 LCTLQ6UWM7 567 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 LRRC70Q7Z2Q7 622 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 FAM57AQ8TBR7 257 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 SEMA4BQ9NPR2 832 aaPredicted RBP19.09■□□□□ 0.65
SRSF1-206ENST00000583741 ANGPTL3Q9Y5C1 460 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 DNAJC13O75165 2243 aa19.09■□□□□ 0.65
SRSF1-206ENST00000583741 SAGE2PA6NJ88 616 aa19.08■□□□□ 0.64
SRSF1-206ENST00000583741 K7EPI3 171 aa19.08■□□□□ 0.64
SRSF1-206ENST00000583741 TFECO14948 347 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms