RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ZNF595Q8IYB9 648 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 EFCAB3Q8N7B9 438 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 ADAMTS17Q8TE56 1095 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 SNRNP27Q8WVK2 155 aaKnown RBP14.6□□□□□ -0.07
SS18-216ENST00000580751 METTL21AQ8WXB1 218 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 THAP4Q8WY91 577 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 MAPKAP1Q9BPZ7 522 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 VN1R1Q9GZP7 353 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 LANCL2Q9NS86 450 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 KCMF1Q9P0J7 381 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 MCM8Q9UJA3 840 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 MMACHCQ9Y4U1 282 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 NUP210LQ5VU65 1888 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 SYNDIG1LA6NDD5 238 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 TMPRSS11DO60235 418 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 PCDH7O60245 1069 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 B4GALT2O60909 372 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 CDC123O75794 336 aaPredicted RBP14.59□□□□□ -0.07
SS18-216ENST00000580751 FAM58BPP0C7Q3 252 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 PRKAR1AP10644 381 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 DDX5P17844 614 aaKnown RBP14.59□□□□□ -0.07
SS18-216ENST00000580751 CPN2P22792 545 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 TLX1P31314 330 aaPredicted RBP14.59□□□□□ -0.07
SS18-216ENST00000580751 TIA1P31483 386 aaKnown RBP eCLIP14.59□□□□□ -0.07
SS18-216ENST00000580751 BUD31P41223 144 aaPredicted RBP14.59□□□□□ -0.07
SS18-216ENST00000580751 RASSF2P50749 326 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 HSD17B7P56937 341 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 TRA2BP62995 288 aaKnown RBP14.59□□□□□ -0.07
SS18-216ENST00000580751 RPL38P63173 70 aaKnown RBP14.59□□□□□ -0.07
SS18-216ENST00000580751 CXADRP78310 365 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 TNFRSF17Q02223 184 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 KLF10Q13118 480 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 LACTB2Q53H82 288 aaPredicted RBP14.59□□□□□ -0.07
SS18-216ENST00000580751 IL23RQ5VWK5 629 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 MRM1Q6IN84 353 aaKnown RBP14.59□□□□□ -0.07
SS18-216ENST00000580751 QSOX2Q6ZRP7 698 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 CCDC121Q6ZUS5 278 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 MRGPREQ86SM8 312 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 FAM47BQ8NA70 645 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 RP9Q8TA86 221 aaKnown RBP14.59□□□□□ -0.07
SS18-216ENST00000580751 APIPQ96GX9 242 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 CATSPER2Q96P56 530 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 WDR41Q9HAD4 459 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 C19orf25Q9UFG5 118 aaPredicted RBP14.59□□□□□ -0.07
SS18-216ENST00000580751 FBXW2Q9UKT8 454 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 POLHQ9Y253 713 aa14.59□□□□□ -0.07
SS18-216ENST00000580751 CCDC88CQ9P219 2028 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 GNG14A0A1W2PPG7 69 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 CYR61O00622 381 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 PEX12O00623 359 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 ALOX12BO75342 701 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 SLC22A3O75751 556 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 GBAP04062 536 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 C8orf89P0DMQ9 161 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 NR2F6P10588 404 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 BCKDHAP12694 445 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 PRPS1L1P21108 318 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 GPX3P22352 226 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 CALB2P22676 271 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 RPL3P39023 403 aaKnown RBP14.58□□□□□ -0.08
SS18-216ENST00000580751 CLNS1AP54105 237 aaKnown RBP14.58□□□□□ -0.08
SS18-216ENST00000580751 DIO3P55073 304 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 HNRNPH2P55795 449 aaKnown RBP14.58□□□□□ -0.08
SS18-216ENST00000580751 CLDN8P56748 225 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 RHAGQ02094 409 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 BNIP1Q12981 228 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 DPY19L1Q2PZI1 675 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 IKBIPQ70UQ0 350 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 PPP1R32Q7Z5V6 425 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 SHISA5Q8N114 240 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 PLPP5Q8NEB5 264 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 C7orf57Q8NEG2 295 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 NSL1Q96IY1 281 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 CSF3RQ99062 836 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 ZBTB18Q99592 522 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 SLC25A23Q9BV35 468 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 PRDM9Q9NQV7 894 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 PRTFDC1Q9NRG1 225 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 TAGLN3Q9UI15 199 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 ATG4BQ9Y4P1 393 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 ASB4Q9Y574 426 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 HS3ST3B1Q9Y662 390 aa14.58□□□□□ -0.08
SS18-216ENST00000580751 FAM227AF5H4B4 570 aa14.57□□□□□ -0.08
SS18-216ENST00000580751 PROM1O43490 865 aa14.57□□□□□ -0.08
SS18-216ENST00000580751 G6PDP11413 515 aa14.57□□□□□ -0.08
SS18-216ENST00000580751 PIK3R1P27986 724 aa14.57□□□□□ -0.08
SS18-216ENST00000580751 PPP2R1BP30154 601 aa14.57□□□□□ -0.08
SS18-216ENST00000580751 SLC13A2Q13183 592 aa14.57□□□□□ -0.08
SS18-216ENST00000580751 STX5Q13190 355 aa14.57□□□□□ -0.08
SS18-216ENST00000580751 UBAP2LQ14157 1087 aaKnown RBP14.57□□□□□ -0.08
SS18-216ENST00000580751 NSDHLQ15738 373 aa14.57□□□□□ -0.08
SS18-216ENST00000580751 COQ5Q5HYK3 327 aa14.57□□□□□ -0.08
SS18-216ENST00000580751 ATP1A1-AS1Q5TC04 95 aa14.57□□□□□ -0.08
SS18-216ENST00000580751 TMEM205Q6UW68 189 aa14.57□□□□□ -0.08
SS18-216ENST00000580751 TMEM151BQ8IW70 566 aa14.57□□□□□ -0.08
SS18-216ENST00000580751 SCUBE1Q8IWY4 988 aa14.57□□□□□ -0.08
SS18-216ENST00000580751 ZNF764Q96H86 408 aaPredicted RBP14.57□□□□□ -0.08
SS18-216ENST00000580751 PTCHD1Q96NR3 888 aa14.57□□□□□ -0.08
SS18-216ENST00000580751 FAIM2Q9BWQ8 316 aa14.57□□□□□ -0.08
SS18-216ENST00000580751 RPF2Q9H7B2 306 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms