RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 TNNI3P19429 210 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 TLX1P31314 330 aaPredicted RBP17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 CD96P40200 585 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 UQCRFS1P47985 274 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 CLCN2P51788 898 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 IGLV3-21P80748 117 aaPredicted RBP17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 HMGCS1Q01581 520 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 TUBA3CQ13748 450 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 CFAP157Q5JU67 520 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 CCNYL2Q5T2Q4 361 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 ZNF468Q5VIY5 522 aaPredicted RBP17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 LIPMQ5VYY2 423 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 TUBA3EQ6PEY2 450 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 TMEM132CQ8N3T6 1108 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 C1orf52Q8N6N3 182 aaKnown RBP17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 TCP10LQ8TDR4 215 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 TANKQ92844 425 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 VMP1Q96GC9 406 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 SIGLEC12Q96PQ1 595 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 MECRQ9BV79 373 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 GATA5Q9BWX5 397 aaPredicted RBP17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 DEFB126Q9BYW3 111 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 ACPTQ9BZG2 426 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 LIN28AQ9H9Z2 209 aaKnown RBP17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 VPS29Q9UBQ0 182 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 ADAM29Q9UKF5 820 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 COPG1Q9Y678 874 aaKnown RBP17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 CLCA3PQ9Y6N3 262 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 TRAV17A0A0B4J275 112 aa17.39■□□□□ 0.37
PPP4R1-215ENST00000580182 A0A1W2PS29 197 aa17.39■□□□□ 0.37
PPP4R1-215ENST00000580182 GABRR3A8MPY1 467 aa17.39■□□□□ 0.37
PPP4R1-215ENST00000580182 DDAH2O95865 285 aa17.39■□□□□ 0.37
PPP4R1-215ENST00000580182 SERPINB3P29508 390 aa17.39■□□□□ 0.37
PPP4R1-215ENST00000580182 ALDH3A1P30838 453 aa17.39■□□□□ 0.37
PPP4R1-215ENST00000580182 STT3AP46977 705 aa17.39■□□□□ 0.37
PPP4R1-215ENST00000580182 MLF1P58340 268 aa17.39■□□□□ 0.37
PPP4R1-215ENST00000580182 CSTF3Q12996 717 aaKnown RBP17.39■□□□□ 0.37
PPP4R1-215ENST00000580182 C16orf47Q6ZP98 133 aaPredicted RBP17.39■□□□□ 0.37
PPP4R1-215ENST00000580182 PAGE2Q7Z2X7 111 aa17.39■□□□□ 0.37
PPP4R1-215ENST00000580182 ZIM3Q96PE6 472 aa17.39■□□□□ 0.37
PPP4R1-215ENST00000580182 SMC6Q96SB8 1091 aa17.39■□□□□ 0.37
PPP4R1-215ENST00000580182 OR8D2Q9GZM6 311 aa17.39■□□□□ 0.37
PPP4R1-215ENST00000580182 NBASA2RRP1 2371 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 TMEM200CA6NKL6 621 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 TCP11X1B4DZS4 312 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 VPS4BO75351 444 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 GPR75O95800 540 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 TUBBP07437 444 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 HSD3B1P14060 373 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 GNLYP22749 145 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 HSD3B2P26439 372 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 MAPK12P53778 367 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 SRSF11Q05519 484 aaKnown RBP17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 SPINK14Q6IE38 97 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 ATCAYQ86WG3 371 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 MMP21Q8N119 569 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 MORN4Q8NDC4 146 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 OR14A16Q8NHC5 309 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 SLC2A12Q8TD20 617 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 CHTF18Q8WVB6 975 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 DAZLQ92904 295 aaKnown RBP17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 APIPQ96GX9 242 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 DGAT2Q96PD7 388 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 UTP23Q9BRU9 249 aaKnown RBP17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 HES7Q9BYE0 225 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 CLMPQ9H6B4 373 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 WDR41Q9HAD4 459 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 ABI3Q9P2A4 366 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 MID2Q9UJV3 735 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 VPS4AQ9UN37 437 aa17.38■□□□□ 0.37
PPP4R1-215ENST00000580182 HRKO00198 91 aa17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 RGS16O15492 202 aaPredicted RBP17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 TYROBPO43914 113 aa17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 PRAMEF2O60811 474 aa17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 TRIM13O60858 407 aa17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 ALOX15P16050 662 aaPredicted RBP17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 NAA20P61599 178 aa17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 RAE1P78406 368 aaKnown RBP17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 OC90Q02509 493 aaPredicted RBP17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 BTKQ06187 659 aa17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 OR1C1Q15619 314 aa17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 CEP85LQ5SZL2 805 aa17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 NDUFAF5Q5TEU4 345 aa17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 CLEC6AQ6EIG7 209 aa17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 RPUSD3Q6P087 351 aaKnown RBP17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 LGI4Q8N135 537 aa17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 GALNT11Q8NCW6 608 aa17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 MDS2Q8NDY4 140 aa17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 GRHL3Q8TE85 626 aa17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 ZNF721Q8TF20 911 aa17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 TM4SF18Q96CE8 201 aa17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 TAAR6Q96RI8 345 aa17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 BARD1Q99728 777 aaKnown RBP17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 NMRK1Q9NWW6 199 aa17.37■□□□□ 0.37
PPP4R1-215ENST00000580182 SYNDIG1LA6NDD5 238 aa17.36■□□□□ 0.37
PPP4R1-215ENST00000580182 MRPL49Q13405 166 aaKnown RBP17.36■□□□□ 0.37
PPP4R1-215ENST00000580182 NR6A1Q15406 480 aa17.36■□□□□ 0.37
PPP4R1-215ENST00000580182 ZNF750Q32MQ0 723 aa17.36■□□□□ 0.37
PPP4R1-215ENST00000580182 ZNF766Q5HY98 468 aa17.36■□□□□ 0.37
PPP4R1-215ENST00000580182 OR52E8Q6IFG1 317 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms