RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 ITGA10O75578 1167 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 SLC25A12O75746 678 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 OR4F21O95013 312 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 MLYCDO95822 493 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 SHBGP04278 402 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 NR2F6P10588 404 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 HSD3B1P14060 373 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 TNNI3P19429 210 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 HSD3B2P26439 372 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 GALNSP34059 522 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 PLIN5Q00G26 463 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 C18orf63Q68DL7 685 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 HSDL2Q6YN16 418 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 GPALPP1Q8IXQ4 340 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 ST13P4Q8IZP2 240 aaPredicted RBP13.81□□□□□ -0.2
SS18-212ENST00000579061 METTL4Q8N3J2 472 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 TRPC4APQ8TEL6 797 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 SELENOMQ8WWX9 145 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 TMEM125Q96AQ2 219 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 RBM18Q96H35 190 aaKnown RBP13.81□□□□□ -0.2
SS18-212ENST00000579061 ART5Q96L15 291 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 DGAT2Q96PD7 388 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 TMEM237Q96Q45 408 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 KLHL1Q9NR64 748 aa13.81□□□□□ -0.2
SS18-212ENST00000579061 RYDENQ9NUL5 291 aaKnown RBP13.81□□□□□ -0.2
SS18-212ENST00000579061 DOPEY1Q5JWR5 2465 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 MYOCOSA0A1B0GUC4 107 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 A0A1W2PR48 441 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 WIPF3A6NGB9 483 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 TMEM200CA6NKL6 621 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 PRKNO60260 465 aaPredicted RBP13.8□□□□□ -0.2
SS18-212ENST00000579061 NME2P1O60361 137 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 GPR75O95800 540 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 PDYNP01213 254 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 KRT6AP02538 564 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 KRT6BP04259 564 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 ALOX15P16050 662 aaPredicted RBP13.8□□□□□ -0.2
SS18-212ENST00000579061 KRT15P19012 456 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 TSPAN8P19075 237 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 NME2P22392 152 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 CRHR1P34998 444 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 CCT5P48643 541 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 KRT6CP48668 564 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 SSR4P51571 173 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 ID2Q02363 134 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 FOLH1Q04609 750 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 GTF3C1Q12789 2109 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 CCDC153Q494R4 210 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 GPRIN3Q6ZVF9 776 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 GALNTL5Q7Z4T8 443 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 ZNF227Q86WZ6 799 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 OR4N5Q8IXE1 308 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 TMEM156Q8N614 296 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 OR5L2Q8NGL0 311 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 SLC2A12Q8TD20 617 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 ZNF721Q8TF20 911 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 THAP3Q8WTV1 239 aaPredicted RBP13.8□□□□□ -0.2
SS18-212ENST00000579061 HES7Q9BYE0 225 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 OR8D2Q9GZM6 311 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 MYOTQ9UBF9 498 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 COPS7AQ9UBW8 275 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 ERRFI1Q9UJM3 462 aaPredicted RBP13.8□□□□□ -0.2
SS18-212ENST00000579061 EMCNQ9ULC0 261 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 GRID1Q9ULK0 1009 aa13.8□□□□□ -0.2
SS18-212ENST00000579061 KLF13Q9Y2Y9 288 aaPredicted RBP13.8□□□□□ -0.2
SS18-212ENST00000579061 ARHGAP10A1A4S6 786 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 H3BQF6 201 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 GUCY1B2O75343 617 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 AIFM1O95831 613 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 IGKV3-11P04433 115 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 ENO1P06733 434 aaKnown RBP13.79□□□□□ -0.2
SS18-212ENST00000579061 KLK1P06870 262 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 STSP08842 583 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 MST1P26927 711 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 SLCO1A2P46721 670 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 ST13P50502 369 aaKnown RBP13.79□□□□□ -0.2
SS18-212ENST00000579061 PKNOX1P55347 436 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 RNF4P78317 190 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 PMP22Q01453 160 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 CSTF3Q12996 717 aaKnown RBP13.79□□□□□ -0.2
SS18-212ENST00000579061 LCP2Q13094 533 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 MAPKAPK3Q16644 382 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 SPRED3Q2MJR0 410 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.79□□□□□ -0.2
SS18-212ENST00000579061 C4orf17Q53FE4 359 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 KRTCAP3Q53RY4 240 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 SGO1Q5FBB7 561 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 OR52E8Q6IFG1 317 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 ZYG11AQ6WRX3 759 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 CYP4Z2PQ8N1L4 340 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 RIBC1Q8N443 379 aaPredicted RBP13.79□□□□□ -0.2
SS18-212ENST00000579061 POGLUT1Q8NBL1 392 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 SENP5Q96HI0 755 aaPredicted RBP13.79□□□□□ -0.2
SS18-212ENST00000579061 FBXL20Q96IG2 436 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 FRMD6Q96NE9 622 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 MRPL1Q9BYD6 325 aaKnown RBP13.79□□□□□ -0.2
SS18-212ENST00000579061 FARSBQ9NSD9 589 aaKnown RBP13.79□□□□□ -0.2
SS18-212ENST00000579061 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.79□□□□□ -0.2
SS18-212ENST00000579061 SLC12A4Q9UP95 1085 aa13.79□□□□□ -0.2
SS18-212ENST00000579061 CROCCQ5TZA2 2017 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms