RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 GSC2O15499 205 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 BRINP1O60477 761 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 DNAJA2O60884 412 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 CIB2O75838 187 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 BMP10O95393 424 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 STAMBPO95630 424 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 LAMP1P11279 417 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 ITGAXP20702 1163 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 ALAS2P22557 587 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 MPIP34949 423 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 MANFP55145 182 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 PSME3P61289 254 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 MC1RQ01726 317 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 PRAMEF17Q5VTA0 474 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 SLC2A7Q6PXP3 512 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 IGF2-ASQ6U949 168 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 BNC2Q6ZN30 1099 aaPredicted RBP13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 OR9A4Q8NGU2 314 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 OR5P2Q8WZ92 322 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 GTF2H4Q92759 462 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 CCDC115Q96NT0 180 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 SLC46A1Q96NT5 459 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 MAPKAP1Q9BPZ7 522 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 THTPAQ9BU02 230 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 ULBP3Q9BZM4 244 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 RAD21L1Q9H4I0 556 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 RPF2Q9H7B2 306 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 NEUROD4Q9HD90 331 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 SLC35C2Q9NQQ7 365 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 THSD1Q9NS62 852 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 TEX10Q9NXF1 929 aaPredicted RBP13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 FOXJ2Q9P0K8 574 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 MAP10Q9P2G4 905 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 BCAP29Q9UHQ4 241 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 ANGPTL2Q9UKU9 493 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 ATG4BQ9Y4P1 393 aa13.14□□□□□ -0.31
CSNK1D-209ENST00000578904 CACNA1GO43497 2377 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 A0A0A6YYC8 382 aaPredicted RBP13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 A0A1B0GX78 115 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 A0A1W2PR48 441 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 C4orf51C9J302 202 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 H0YHG0 523 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 I3L1I5 382 aaPredicted RBP13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 SGK494L7N484 410 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 ZNF749O43361 778 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 CPNE3O75131 537 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 DXOO77932 396 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 CPSF4O95639 269 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 AIFM1O95831 613 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 ZCCHC18P0CG32 403 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 NQO1P15559 274 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 CSNK2A2P19784 350 aaPredicted RBP13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 CPOXP36551 454 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 DMTNQ08495 405 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 RUNX2Q13950 521 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 COL9A2Q14055 689 aaPredicted RBP13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 MLC1Q15049 377 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 SAMD4BQ5PRF9 694 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 SLC48A1Q6P1K1 146 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 TTLL10Q6ZVT0 673 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 SCUBE1Q8IWY4 988 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 ZNF595Q8IYB9 648 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 CA13Q8N1Q1 262 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 ARHGEF39Q8N4T4 335 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 AMER3Q8N944 861 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 OR4K14Q8NGD5 310 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 OR8J3Q8NGG0 315 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 OR4A15Q8NGL6 344 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 EXOSC8Q96B26 276 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 CLIP3Q96DZ5 547 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 C10orf90Q96M02 699 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 CGREF1Q99674 301 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 B3GNT4Q9C0J1 378 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 IL1RL2Q9HB29 575 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 ZNF304Q9HCX3 659 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 ASCL3Q9NQ33 180 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 SEMA3GQ9NS98 782 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 ADA2Q9NZK5 511 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 KCMF1Q9P0J7 381 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 PCDHB3Q9Y5E6 796 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 PCDHGA7Q9Y5G6 932 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 CFAP47Q6ZTR5 3102 aa13.13□□□□□ -0.31
CSNK1D-209ENST00000578904 CDRT15L2A8MXV6 281 aa13.12□□□□□ -0.31
CSNK1D-209ENST00000578904 CHST10O43529 356 aa13.12□□□□□ -0.31
CSNK1D-209ENST00000578904 RDH16O75452 317 aa13.12□□□□□ -0.31
CSNK1D-209ENST00000578904 ERAL1O75616 437 aaKnown RBP13.12□□□□□ -0.31
CSNK1D-209ENST00000578904 STK17BO94768 372 aa13.12□□□□□ -0.31
CSNK1D-209ENST00000578904 SLITRK5O94991 958 aa13.12□□□□□ -0.31
CSNK1D-209ENST00000578904 NTRK1P04629 796 aa13.12□□□□□ -0.31
CSNK1D-209ENST00000578904 ZNF28P17035 718 aa13.12□□□□□ -0.31
CSNK1D-209ENST00000578904 FBLP22087 321 aaKnown RBP13.12□□□□□ -0.31
CSNK1D-209ENST00000578904 SLC5A2P31639 672 aa13.12□□□□□ -0.31
CSNK1D-209ENST00000578904 SHC2P98077 582 aa13.12□□□□□ -0.31
CSNK1D-209ENST00000578904 MAP7Q14244 749 aa13.12□□□□□ -0.31
CSNK1D-209ENST00000578904 SPRED3Q2MJR0 410 aa13.12□□□□□ -0.31
CSNK1D-209ENST00000578904 PAGE3Q5JUK9 113 aa13.12□□□□□ -0.31
CSNK1D-209ENST00000578904 LRIF1Q5T3J3 769 aa13.12□□□□□ -0.31
CSNK1D-209ENST00000578904 ANKRD26P1Q6NSI1 321 aa13.12□□□□□ -0.31
CSNK1D-209ENST00000578904 RHBDD2Q6NTF9 364 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms