RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 TRIM46Q7Z4K8 759 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 OR6Y1Q8NGX8 325 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 DAZLQ92904 295 aaKnown RBP18.03■□□□□ 0.48
SS18-208ENST00000577751 UCN3Q969E3 161 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 VMP1Q96GC9 406 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 ILKAPQ9H0C8 392 aaPredicted RBP18.03■□□□□ 0.48
SS18-208ENST00000577751 WDR41Q9HAD4 459 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 SIRT5Q9NXA8 310 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 ZNF223Q9UK11 482 aaPredicted RBP18.03■□□□□ 0.48
SS18-208ENST00000577751 ACTL7BQ9Y614 415 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 CLCA3PQ9Y6N3 262 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 ARHGAP10A1A4S6 786 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 PGRMC2O15173 223 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 MAN1A2O60476 641 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 GPR75O95800 540 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 UQCRHP07919 91 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 SERPINB3P29508 390 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 CLCN2P51788 898 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 MAPK12P53778 367 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 TRA2BP62995 288 aaKnown RBP18.02■□□□□ 0.48
SS18-208ENST00000577751 HMGCS1Q01581 520 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 ZNF169Q14929 603 aaPredicted RBP18.02■□□□□ 0.48
SS18-208ENST00000577751 NDUFAF5Q5TEU4 345 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 SCIMPQ6UWF3 145 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 RPS19BP1Q86WX3 136 aaKnown RBP18.02■□□□□ 0.48
SS18-208ENST00000577751 BEST3Q8N1M1 668 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 MORN4Q8NDC4 146 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 OR14A16Q8NHC5 309 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 NCLNQ969V3 563 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 TM4SF18Q96CE8 201 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 APIPQ96GX9 242 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 SHCBP1LQ9BZQ2 653 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 TRIM4Q9C037 500 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 CDCP1Q9H5V8 836 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 PCDHGA10Q9Y5H3 936 aa18.02■□□□□ 0.48
SS18-208ENST00000577751 OR5H15A6NDH6 313 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 GLOD5A6NK44 160 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 C17orf105B2RV13 164 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 CDK2AP1O14519 115 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 GUCY1B2O75343 617 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 BPGMP07738 259 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 FGF4P08620 206 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 RAE1P78406 368 aaKnown RBP18.01■□□□□ 0.47
SS18-208ENST00000577751 FOXK1P85037 733 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 INPP5JQ15735 1006 aaPredicted RBP18.01■□□□□ 0.47
SS18-208ENST00000577751 SPIN4Q56A73 249 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 OR52E8Q6IFG1 317 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 RPUSD3Q6P087 351 aaKnown RBP18.01■□□□□ 0.47
SS18-208ENST00000577751 GALNT18Q6P9A2 607 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 RNF165Q6ZSG1 346 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 ST13P4Q8IZP2 240 aaPredicted RBP18.01■□□□□ 0.47
SS18-208ENST00000577751 OR1N1Q8NGS0 311 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 CPT1CQ8TCG5 803 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 MIB2Q96AX9 1013 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 RBM18Q96H35 190 aaKnown RBP18.01■□□□□ 0.47
SS18-208ENST00000577751 DEFB126Q9BYW3 111 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 CENPHQ9H3R5 247 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 MCM8Q9UJA3 840 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 CES1P1Q9UKY3 287 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 PCDHA9Q9Y5H5 950 aa18.01■□□□□ 0.47
SS18-208ENST00000577751 FASNP49327 2511 aaKnown RBP18.01■□□□□ 0.47
SS18-208ENST00000577751 TRBV11-1A0A0K0K1C0 115 aa18■□□□□ 0.47
SS18-208ENST00000577751 C1orf226A1L170 272 aa18■□□□□ 0.47
SS18-208ENST00000577751 AZIN1O14977 448 aa18■□□□□ 0.47
SS18-208ENST00000577751 TM9SF1O15321 606 aa18■□□□□ 0.47
SS18-208ENST00000577751 CRCPO75575 148 aa18■□□□□ 0.47
SS18-208ENST00000577751 DDAH2O95865 285 aa18■□□□□ 0.47
SS18-208ENST00000577751 F10P00742 488 aa18■□□□□ 0.47
SS18-208ENST00000577751 CHRNGP07510 517 aa18■□□□□ 0.47
SS18-208ENST00000577751 ALOX15P16050 662 aaPredicted RBP18■□□□□ 0.47
SS18-208ENST00000577751 TNNI3P19429 210 aa18■□□□□ 0.47
SS18-208ENST00000577751 GALNSP34059 522 aa18■□□□□ 0.47
SS18-208ENST00000577751 MLF1P58340 268 aa18■□□□□ 0.47
SS18-208ENST00000577751 ARL13AQ5H913 290 aaPredicted RBP18■□□□□ 0.47
SS18-208ENST00000577751 CLEC6AQ6EIG7 209 aa18■□□□□ 0.47
SS18-208ENST00000577751 DGAT2L6Q6ZPD8 337 aa18■□□□□ 0.47
SS18-208ENST00000577751 HOMEZQ8IX15 550 aa18■□□□□ 0.47
SS18-208ENST00000577751 PPWD1Q96BP3 646 aaKnown RBP18■□□□□ 0.47
SS18-208ENST00000577751 ZBTB9Q96C00 473 aa18■□□□□ 0.47
SS18-208ENST00000577751 SNRNP40Q96DI7 357 aaKnown RBP18■□□□□ 0.47
SS18-208ENST00000577751 DGAT2Q96PD7 388 aa18■□□□□ 0.47
SS18-208ENST00000577751 PELOQ9BRX2 385 aaKnown RBP18■□□□□ 0.47
SS18-208ENST00000577751 RRAGDQ9NQL2 400 aaPredicted RBP18■□□□□ 0.47
SS18-208ENST00000577751 CCL27Q9Y4X3 112 aa18■□□□□ 0.47
SS18-208ENST00000577751 SHANK1Q9Y566 2161 aa17.99■□□□□ 0.47
SS18-208ENST00000577751 TRAV17A0A0B4J275 112 aa17.99■□□□□ 0.47
SS18-208ENST00000577751 NPIPB8E9PQR5 432 aa17.99■□□□□ 0.47
SS18-208ENST00000577751 MYZAPP0CAP1 466 aa17.99■□□□□ 0.47
SS18-208ENST00000577751 DHRS4L1P0CG22 281 aa17.99■□□□□ 0.47
SS18-208ENST00000577751 COX7A2P14406 83 aa17.99■□□□□ 0.47
SS18-208ENST00000577751 SERPINB5P36952 375 aa17.99■□□□□ 0.47
SS18-208ENST00000577751 PLIN5Q00G26 463 aa17.99■□□□□ 0.47
SS18-208ENST00000577751 ACSM2AQ08AH3 577 aa17.99■□□□□ 0.47
SS18-208ENST00000577751 MPP2Q14168 576 aa17.99■□□□□ 0.47
SS18-208ENST00000577751 IGFBP7Q16270 282 aa17.99■□□□□ 0.47
SS18-208ENST00000577751 PRR30Q53SZ7 412 aaPredicted RBP17.99■□□□□ 0.47
SS18-208ENST00000577751 ACSM2BQ68CK6 577 aa17.99■□□□□ 0.47
SS18-208ENST00000577751 ZCCHC23Q6ZST2 131 aa17.99■□□□□ 0.47
SS18-208ENST00000577751 ZNF321PQ8N8H1 164 aa17.99■□□□□ 0.47
SS18-208ENST00000577751 SLC2A12Q8TD20 617 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms