RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 MED27Q6P2C8 311 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 ANKMY2Q8IV38 441 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 TAGAPQ8N103 731 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 ACOT4Q8N9L9 421 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 BBOF1Q8ND07 529 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 FBXO36Q8NEA4 188 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 FAM222BQ8WU58 562 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 TANKQ92844 425 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 SPACA9Q96E40 222 aaPredicted RBP13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 CMTM7Q96FZ5 175 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 POM121Q96HA1 1249 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 FBXL20Q96IG2 436 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 F2RL3Q96RI0 385 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 TMEM79Q9BSE2 394 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 TMUB1Q9BVT8 246 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 MS4A8Q9BY19 250 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 PRDM7Q9NQW5 492 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 ST6GALNAC2Q9UJ37 374 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 RNF112Q9ULX5 631 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 PSAT1Q9Y617 370 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 CELSR1Q9NYQ6 3014 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 CSMD2Q7Z408 3487 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 AHRRA9YTQ3 701 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 TP53I11O14683 189 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 FAM155BO75949 473 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 SCELO95171 688 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 GOSR1O95249 250 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 CCDC166P0CW27 439 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 PCNAP12004 261 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 STMN1P16949 149 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 GCKP35557 465 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 TMED10P49755 219 aaKnown RBP13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 DGKQP52824 942 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 FOXO1Q12778 655 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 CHIT1Q13231 466 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 C18orf21Q32NC0 220 aaPredicted RBP13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 FLYWCH1Q4VC44 716 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 MAATS1Q7Z4T9 603 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 KIF18BQ86Y91 864 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 PM20D2Q8IYS1 436 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 PDPRQ8NCN5 879 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 FAM13CQ8NE31 585 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 PAQR8Q8TEZ7 354 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 ANKRD49Q8WVL7 239 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 SREK1Q8WXA9 508 aaKnown RBP13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 HSPBAP1Q96EW2 488 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 SENP5Q96HI0 755 aaPredicted RBP13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 CAPZA3Q96KX2 299 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 ZNF597Q96LX8 424 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 MAPKAP1Q9BPZ7 522 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 ZNF703Q9H7S9 590 aaPredicted RBP13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 WDR41Q9HAD4 459 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 PLAC1Q9HBJ0 212 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 ACKR4Q9NPB9 350 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 CCM2LQ9NUG4 571 aaPredicted RBP13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 MOCS1Q9NZB8 636 aa13.11□□□□□ -0.31
SMARCD2-205ENST00000577686 OR6C76A6NM76 312 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 OR10H2O60403 315 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 SEC31AO94979 1220 aaKnown RBP13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 IL2RAP01589 272 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 FOSL1P15407 271 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 ALOX15P16050 662 aaPredicted RBP13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 KLK2P20151 261 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 PIGAP37287 484 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 ARFIP1P53367 373 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 ZNF791Q3KP31 576 aaPredicted RBP13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 C6orf163Q5TEZ5 329 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 TMEM198Q66K66 360 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 RTL6Q6ICC9 239 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 RNF111Q6ZNA4 994 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 VN1R5Q7Z5H4 357 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 LACC1Q8IV20 430 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 KLHL7Q8IXQ5 586 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 ULK2Q8IYT8 1036 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 ST13P4Q8IZP2 240 aaPredicted RBP13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 LRRC25Q8N386 305 aaPredicted RBP13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 NEIL3Q8TAT5 605 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 STAG3L4Q8TBR4 150 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 ZNF721Q8TF20 911 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 ZNF473Q8WTR7 871 aaKnown RBP13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 RNASE6Q93091 150 aaKnown RBP13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 RGMAQ96B86 450 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 REPS1Q96D71 796 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 JSRP1Q96MG2 331 aaPredicted RBP13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 ALPK1Q96QP1 1244 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 GAL3ST4Q96RP7 486 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 GPATCH1Q9BRR8 931 aaKnown RBP13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 DOHHQ9BU89 302 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 CNPPD1Q9BV87 410 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 CD244Q9BZW8 370 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 RPF2Q9H7B2 306 aaKnown RBP13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 RASSF1Q9NS23 344 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 NUDT4Q9NZJ9 180 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 OPTCQ9UBM4 332 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 ZNF490Q9ULM2 529 aaPredicted RBP13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 ANGPTL3Q9Y5C1 460 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 MED13LQ71F56 2210 aa13.1□□□□□ -0.31
SMARCD2-205ENST00000577686 SETD2Q9BYW2 2564 aaPredicted RBP13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 C15orf38-AP3S2A0A0A6YYH1 394 aa13.09□□□□□ -0.31
SMARCD2-205ENST00000577686 MYOCOSA0A1B0GUC4 107 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms