RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 KCNC2Q96PR1 638 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 CSF3RQ99062 836 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 DOHHQ9BU89 302 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 ZNF407Q9C0G0 2248 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 CD8B2A6NJW9 211 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 IL18BPO95998 194 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 RFPL3SP0C7P2 107 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 CTSSP25774 331 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 GABRB3P28472 473 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 MSH2P43246 934 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 TRPC1P48995 793 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 PPP2R2BQ00005 443 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 DUSP8Q13202 625 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 PRAMEF20Q5VT98 475 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 NSUN5P2Q63ZY6 315 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 SLCO4C1Q6ZQN7 724 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 ADAMTSL2Q86TH1 951 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 LRRC75A-AS1Q8N1F1 130 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 RASGEF1CQ8N431 466 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 NKAPQ8N5F7 415 aaKnown RBP12.28□□□□□ -0.44
COPS3-214ENST00000577246 FAM13CQ8NE31 585 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 LINC01560Q8TB33 94 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 ZNF721Q8TF20 911 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 SMPDL3BQ92485 455 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 ISL2Q96A47 359 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 COX4I2Q96KJ9 171 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 DGAT2Q96PD7 388 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 BDH2Q9BUT1 245 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 PRDM14Q9GZV8 571 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 EHD1Q9H4M9 534 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 PPANQ9NQ55 473 aaKnown RBP12.28□□□□□ -0.44
COPS3-214ENST00000577246 GPRC5BQ9NZH0 403 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 OARD1Q9Y530 152 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 AKAP6Q13023 2319 aa12.28□□□□□ -0.44
COPS3-214ENST00000577246 LRRC3CA6NJW4 275 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 CAPN14A8MX76 684 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 CASKO14936 926 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 ZNF354AO60765 605 aaPredicted RBP12.27□□□□□ -0.45
COPS3-214ENST00000577246 LDB3O75112 727 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 ERN1O75460 977 aaKnown RBP12.27□□□□□ -0.45
COPS3-214ENST00000577246 LY6G6DO95868 133 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 HRGP04196 525 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 ZNF37AP17032 561 aaPredicted RBP12.27□□□□□ -0.45
COPS3-214ENST00000577246 ZNF136P52737 540 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 PLIN5Q00G26 463 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 CRYZQ08257 329 aaKnown RBP12.27□□□□□ -0.45
COPS3-214ENST00000577246 Q5PR19 223 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 POMZP3Q6PJE2 187 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 ADGRD1Q6QNK2 874 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 CAPN12Q6ZSI9 719 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 SLC29A4Q7RTT9 530 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 PRIMA1Q86XR5 153 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 KRTAP1-3Q8IUG1 177 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 PPIL6Q8IXY8 311 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 AGGF1Q8N302 714 aaeCLIP12.27□□□□□ -0.45
COPS3-214ENST00000577246 NAT8LQ8N9F0 302 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 PIGTQ969N2 578 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 MAGOHBQ96A72 148 aaKnown RBP12.27□□□□□ -0.45
COPS3-214ENST00000577246 NTNG2Q96CW9 530 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 CERS2Q96G23 380 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 RBM18Q96H35 190 aaKnown RBP12.27□□□□□ -0.45
COPS3-214ENST00000577246 SENP5Q96HI0 755 aaPredicted RBP12.27□□□□□ -0.45
COPS3-214ENST00000577246 TIMP4Q99727 224 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 MDFIQ99750 246 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 PIP5K1AQ99755 562 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 TBCDQ9BTW9 1192 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 CNOT10Q9H9A5 744 aaKnown RBP12.27□□□□□ -0.45
COPS3-214ENST00000577246 PRM3Q9NNZ6 103 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 EIF3LQ9Y262 564 aaKnown RBP12.27□□□□□ -0.45
COPS3-214ENST00000577246 CHCHD2Q9Y6H1 151 aaPredicted RBP12.27□□□□□ -0.45
COPS3-214ENST00000577246 VPS13CQ709C8 3753 aa12.27□□□□□ -0.45
COPS3-214ENST00000577246 DNAJC13O75165 2243 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 IQANK1A0A1B0GTG1 560 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 MYOCOSA0A1B0GUC4 107 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 ANKRD33BA6NCL7 494 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 MBD3L4A6NDZ8 208 aaPredicted RBP12.26□□□□□ -0.45
COPS3-214ENST00000577246 MBD3L3A6NE82 208 aaPredicted RBP12.26□□□□□ -0.45
COPS3-214ENST00000577246 MBD3L5A6NJ08 208 aaPredicted RBP12.26□□□□□ -0.45
COPS3-214ENST00000577246 TP53I11O14683 189 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 CLGNO14967 610 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 SMPD2O60906 423 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 ETHE1O95571 254 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 C1QAP02745 245 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 FBXO45P0C2W1 286 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 GCKP35557 465 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 STT3AP46977 705 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 RCAN2Q14206 197 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 HIST2H2ACQ16777 129 aaPredicted RBP12.26□□□□□ -0.45
COPS3-214ENST00000577246 KCTD19Q17RG1 926 aaPredicted RBP12.26□□□□□ -0.45
COPS3-214ENST00000577246 PAGE2BQ5JRK9 111 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 HIST2H2AA3Q6FI13 130 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 PRSS57Q6UWY2 283 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 SYDE1Q6ZW31 735 aaPredicted RBP12.26□□□□□ -0.45
COPS3-214ENST00000577246 CXXC5Q7LFL8 322 aaKnown RBP12.26□□□□□ -0.45
COPS3-214ENST00000577246 C9orf40Q8IXQ3 194 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 TAGAPQ8N103 731 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 TCAIMQ8N3R3 496 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 TRIM58Q8NG06 486 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 OR10G3Q8NGC4 313 aa12.26□□□□□ -0.45
COPS3-214ENST00000577246 MBD3L2Q8NHZ7 208 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms