RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 BSGP35613 385 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 ARL1P40616 181 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 PIK3CBP42338 1070 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 LIM2P55344 173 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 POLE2P56282 527 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 STXBP1P61764 594 aaKnown RBP8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 OCA2Q04671 838 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 EEF1A2Q05639 463 aaKnown RBP8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 LCP2Q13094 533 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 RAPSNQ13702 412 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 SSPNQ14714 243 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 ABRAXAS2Q15018 415 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 PCOLCEQ15113 449 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 MINDY4Q4G0A6 757 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 COLEC12Q5KU26 742 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 LIPMQ5VYY2 423 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 CLEC6AQ6EIG7 209 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 TMEM205Q6UW68 189 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 GPRIN3Q6ZVF9 776 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 FAM214BQ7L5A3 538 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 SLC22A9Q8IVM8 553 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 ACOT4Q8N9L9 421 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 CCDC63Q8NA47 563 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 FAM47BQ8NA70 645 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 DNAJB8Q8NHS0 232 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 RDH11Q8TC12 318 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 CMTM7Q96FZ5 175 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 MRPL1Q9BYD6 325 aaKnown RBP8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 C20orf27Q9GZN8 174 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 NECTIN3Q9NQS3 549 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 ZNF446Q9NWS9 450 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 TRPS1Q9UHF7 1281 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 FBXL4Q9UKA2 621 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 POLHQ9Y253 713 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 PADI2Q9Y2J8 665 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 TENM4Q6N022 2769 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 TLN1Q9Y490 2541 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 IGKV3D-11A0A0A0MRZ8 115 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 A0A0A6YYD5 115 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 A0A1W2PS29 197 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 WDR91A4D1P6 747 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 FOXE1O00358 373 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 PRPF4O43172 522 aaKnown RBP eCLIP8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 ITM2AO43736 263 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 HEXBP07686 556 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 BPGMP07738 259 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 DHRS4L1P0CG22 281 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 PIM1P11309 404 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 HIST1H1TP22492 207 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 TPP2P29144 1249 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 EMP2P54851 167 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 HNRNPH2P55795 449 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 HMGCS1Q01581 520 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 MC1RQ01726 317 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 GALNT1Q10472 559 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 TBL3Q12788 808 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 TTMPQ5BVD1 217 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 DCAF10Q5QP82 559 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 C18orf63Q68DL7 685 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 OR4C11Q6IEV9 310 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 TRIM40Q6P9F5 258 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 ANKRD37Q7Z713 158 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 CDH24Q86UP0 819 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 APLFQ8IW19 511 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 MMP21Q8N119 569 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 PPP4R1Q8TF05 950 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 THAP4Q8WY91 577 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 UBE2E3Q969T4 207 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 TBC1D20Q96BZ9 403 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 KCNC2Q96PR1 638 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 SERINC2Q96SA4 455 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 NUDT9Q9BW91 350 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 ACPTQ9BZG2 426 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 ING2Q9H160 280 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 TUBB1Q9H4B7 451 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 ZBTB20Q9HC78 741 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 ZNF160Q9HCG1 818 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 MID1IP1Q9NPA3 183 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 SEMA3GQ9NS98 782 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 C14orf105Q9NVL8 296 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 NXT1Q9UKK6 140 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 DAPP1Q9UN19 280 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 ATG4BQ9Y4P1 393 aa8.88□□□□□ -0.99
NPLOC4-219ENST00000576713 LOC102723996A0A087X1L8 192 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 IGHV1-45A0A0A0MS14 117 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 A0A1W2PQ72 361 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 A6NL46 340 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 TRIM13O60858 407 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 LYPLA1O75608 230 aaPredicted RBP8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 SEC24DO94855 1032 aaPredicted RBP8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 UBOX5O94941 541 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 MYZAPP0CAP1 466 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 RNH1P13489 461 aaKnown RBP8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 PTX3P26022 381 aaPredicted RBP8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 SSR2P43308 183 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 CD97P48960 835 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 CCL11P51671 97 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 MTTPP55157 894 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 PKNOX1P55347 436 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 MAGOHP61326 146 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms