RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 MRPS15P82914 257 aaKnown RBP14.88□□□□□ -0.03
NUP88-207ENST00000573584 TAP2Q03519 686 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 ZNF91Q05481 1191 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 TAB1Q15750 504 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 TMEM201Q5SNT2 666 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 LIPKQ5VXJ0 399 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 ERAP2Q6P179 960 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 ADIPOR2Q86V24 386 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 TMC8Q8IU68 726 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 NANOGP1Q8N7R0 232 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 GPR32P1Q8NGA4 272 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 OR8J1Q8NGP2 316 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 SORCS1Q8WY21 1168 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 TSSK6Q9BXA6 273 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 RACGAP1Q9H0H5 632 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 POLR2J3Q9H1A7 115 aaKnown RBP14.88□□□□□ -0.03
NUP88-207ENST00000573584 NDUFB11Q9NX14 153 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 NDOR1Q9UHB4 597 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 HYKKA2RU49 373 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 CENPXA8MT69 81 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 C1DQ13901 141 aaKnown RBP14.87□□□□□ -0.03
NUP88-207ENST00000573584 TRIM60Q495X7 471 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 THOC7Q6I9Y2 204 aaKnown RBP14.87□□□□□ -0.03
NUP88-207ENST00000573584 PAQR6Q6TCH4 344 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 DEF8Q6ZN54 512 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 TMCO2Q7Z6W1 182 aaPredicted RBP14.87□□□□□ -0.03
NUP88-207ENST00000573584 RBM45Q8IUH3 476 aaKnown RBP14.87□□□□□ -0.03
NUP88-207ENST00000573584 FBXO15Q8NCQ5 510 aaPredicted RBP14.87□□□□□ -0.03
NUP88-207ENST00000573584 PROKR2Q8NFJ6 384 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 OR9Q1Q8NGQ5 310 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 OR9A1PQ8NGU1 263 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 CYB5D2Q8WUJ1 264 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 TMEM19Q96HH6 336 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 PHOX2BQ99453 314 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 RSPO3Q9BXY4 272 aaPredicted RBP14.87□□□□□ -0.03
NUP88-207ENST00000573584 SRRQ9GZT4 340 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 MTG2Q9H4K7 406 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 NFKBIL1Q9UBC1 381 aaPredicted RBP14.87□□□□□ -0.03
NUP88-207ENST00000573584 ICKQ9UPZ9 632 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 CMAHPQ9Y471 501 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 A0A1W2PQ09 198 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 TFECO14948 347 aaPredicted RBP14.87□□□□□ -0.03
NUP88-207ENST00000573584 LRG1P02750 347 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 H1F0P07305 194 aaKnown RBP14.87□□□□□ -0.03
NUP88-207ENST00000573584 ELFN1P0C7U0 828 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 ITGB7P26010 798 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 DAB2P98082 770 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 C12orf73Q69YU5 71 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 IKBIPQ70UQ0 350 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 PHC2Q8IXK0 858 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 GALNT6Q8NCL4 622 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 RAB8BQ92930 207 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 ST6GAL2Q96JF0 529 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 DMRTB1Q96MA1 342 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 SLC6A18Q96N87 628 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 WDFY2Q96P53 400 aa14.87□□□□□ -0.03
NUP88-207ENST00000573584 HMX1Q9NP08 348 aaPredicted RBP14.87□□□□□ -0.03
NUP88-207ENST00000573584 DOCK6Q96HP0 2047 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 SLC35F4A4IF30 521 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 FAAHO00519 579 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 MYL12BO14950 172 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 TPST2O60704 377 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 CDRT1O95170 752 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 ALDH1A1P00352 501 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 CTSLP07711 333 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 TNNI3P19429 210 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 GSTM5P46439 218 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 MANFP55145 182 aaKnown RBP14.86□□□□□ -0.03
NUP88-207ENST00000573584 TARDBPQ13148 414 aaKnown RBP eCLIP14.86□□□□□ -0.03
NUP88-207ENST00000573584 HEPACAMQ14CZ8 416 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 LARS2Q15031 903 aaKnown RBP14.86□□□□□ -0.03
NUP88-207ENST00000573584 CELF5Q8N6W0 485 aaKnown RBP14.86□□□□□ -0.03
NUP88-207ENST00000573584 MEIOCA2RUB1 952 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 HEPACAM2A8MVW5 462 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 INHAP05111 366 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 DDOSTP39656 456 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 SCN1BQ07699 218 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 MLLT11Q13015 90 aaPredicted RBP14.86□□□□□ -0.03
NUP88-207ENST00000573584 GRIN2CQ14957 1233 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 MFSD4BQ5TF39 518 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 TMEM215Q68D42 235 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 PGBD2Q6P3X8 592 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 TMIGD1Q6UXZ0 262 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 DPPA4Q7L190 304 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 TRAPPC5Q8IUR0 188 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 LILRB4Q8NHJ6 448 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 NEURL3Q96EH8 262 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 RERGLQ9H628 205 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 A4GALTQ9NPC4 353 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 TVP23BQ9NYZ1 205 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 ABT1Q9ULW3 272 aaKnown RBP14.86□□□□□ -0.03
NUP88-207ENST00000573584 SCN5AQ14524 2016 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 PRRC2BQ5JSZ5 2229 aaKnown RBP14.86□□□□□ -0.03
NUP88-207ENST00000573584 HELZP42694 1942 aaKnown RBP14.86□□□□□ -0.03
NUP88-207ENST00000573584 PLD2O14939 933 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 TGM5O43548 720 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 TLX2O43763 284 aaPredicted RBP14.86□□□□□ -0.03
NUP88-207ENST00000573584 TYRP14679 529 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 OPRD1P41143 372 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 WDR5P61964 334 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms