RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 TRIM49P0CI25 452 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 TRIM49CP0CI26 452 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 P4HA1P13674 534 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 ZNF182P17025 639 aaPredicted RBP5.09□□□□□ -1.59
SF3B3-214ENST00000572365 FBLP22087 321 aaKnown RBP5.09□□□□□ -1.59
SF3B3-214ENST00000572365 CASP14P31944 242 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 MMP13P45452 471 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 ME1P48163 572 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 GCLMP48507 274 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 NANOS3P60323 173 aaKnown RBP5.09□□□□□ -1.59
SF3B3-214ENST00000572365 ADORA2A-AS1P86434 159 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 SULT2A1Q06520 285 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 LTBQ06643 244 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 ITGADQ13349 1161 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 DYNC1I2Q13409 638 aaKnown RBP5.09□□□□□ -1.59
SF3B3-214ENST00000572365 IRF3Q14653 427 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 WSCD2Q2TBF2 565 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 C1orf220Q5T0J3 134 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 TMEM198Q66K66 360 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 ATL3Q6DD88 541 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 PLEKHA7Q6IQ23 1121 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 KIAA1161Q6NSJ0 714 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 FBXL22Q6P050 247 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 PMF1Q6P1K2 205 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 DUS1LQ6P1R4 473 aaKnown RBP5.09□□□□□ -1.59
SF3B3-214ENST00000572365 TAC4Q86UU9 113 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 SLC47A2Q86VL8 602 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 NAGSQ8N159 534 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 PELI3Q8N2H9 469 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 SPC24Q8NBT2 197 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 TAS1R2Q8TE23 839 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 DQX1Q8TE96 717 aaKnown RBP5.09□□□□□ -1.59
SF3B3-214ENST00000572365 CT55Q8WUE5 264 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 N4BP2L2Q92802 583 aaPredicted RBP5.09□□□□□ -1.59
SF3B3-214ENST00000572365 PPP1R14BQ96C90 147 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 ERP27Q96DN0 273 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 SLC41A2Q96JW4 573 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 RPRD1AQ96P16 312 aaPredicted RBP5.09□□□□□ -1.59
SF3B3-214ENST00000572365 BAG1Q99933 345 aaPredicted RBP5.09□□□□□ -1.59
SF3B3-214ENST00000572365 DDX50Q9BQ39 737 aaKnown RBP5.09□□□□□ -1.59
SF3B3-214ENST00000572365 TMEM79Q9BSE2 394 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 ULBP3Q9BZM4 244 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 ZBTB20Q9HC78 741 aaPredicted RBP5.09□□□□□ -1.59
SF3B3-214ENST00000572365 CYSLTR2Q9NS75 346 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 SIRT3Q9NTG7 399 aaPredicted RBP5.09□□□□□ -1.59
SF3B3-214ENST00000572365 SH3BGRL2Q9UJC5 107 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 TSPAN16Q9UKR8 245 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 TMEM5Q9Y2B1 443 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 OR51B4Q9Y5P0 310 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 SNX8Q9Y5X2 465 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 CEPT1Q9Y6K0 416 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 ANKRD12Q6UB98 2062 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 IGHV1OR21-1A0A087WYE8 117 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 POLR1CO15160 346 aaPredicted RBP5.08□□□□□ -1.6
SF3B3-214ENST00000572365 ALOX15BO15296 676 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 LDB2O43679 373 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 NUDT21O43809 227 aaKnown RBP5.08□□□□□ -1.6
SF3B3-214ENST00000572365 SLC25A12O75746 678 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 TM7SF2O76062 418 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 RGS11O94810 467 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 NDUFB4O95168 129 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 PGM3O95394 542 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 CBSLP0DN79 551 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 THRAP10827 490 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 GABRB1P18505 474 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 TNFRSF1BP20333 461 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 TBXAS1P24557 533 aaPredicted RBP5.08□□□□□ -1.6
SF3B3-214ENST00000572365 CBSP35520 551 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 GCKP35557 465 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 PSMD7P51665 324 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 CCNHP51946 323 aaPredicted RBP5.08□□□□□ -1.6
SF3B3-214ENST00000572365 PLK1P53350 603 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 KCNK10P57789 538 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 TLE4Q04727 773 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 INCA1Q0VD86 236 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 ASTE1Q2TB18 679 aaPredicted RBP5.08□□□□□ -1.6
SF3B3-214ENST00000572365 VWA2Q5GFL6 755 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 WASHC2DQ5SRD0 308 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 DCAF12L2Q5VW00 463 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 KLHL10Q6JEL2 608 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 C22orf39Q6P5X5 142 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 CEACAM20Q6UY09 585 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 NRROSQ86YC3 692 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 TTC30BQ8N4P2 665 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 ZBTB2Q8N680 514 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 NANOGP1Q8N7R0 232 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 OR6C4Q8NGE1 309 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 OR4D9Q8NGE8 314 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 SEMA4DQ92854 862 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 CCDC47Q96A33 483 aaKnown RBP5.08□□□□□ -1.6
SF3B3-214ENST00000572365 CCDC34Q96HJ3 373 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 TNMDQ9H2S6 317 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 ACTL8Q9H568 366 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 FGF22Q9HCT0 170 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 RANGRFQ9HD47 186 aaPredicted RBP5.08□□□□□ -1.6
SF3B3-214ENST00000572365 OLFML3Q9NRN5 406 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 CISHQ9NSE2 258 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 NKIRAS2Q9NYR9 191 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 LNPEPQ9UIQ6 1025 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 PCDHGB4Q9UN71 923 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms