RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 CTAGE4Q8IX94 777 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 PTGR2Q8N8N7 351 aaPredicted RBP11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 NOA1Q8NC60 698 aaKnown RBP11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 SLC2A12Q8TD20 617 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 PTPMT1Q8WUK0 201 aaPredicted RBP11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 SLC44A1Q8WWI5 657 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 SREK1Q8WXA9 508 aaKnown RBP11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 GPR78Q96P69 363 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 DGAT2Q96PD7 388 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 PAFAH2Q99487 392 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 SORBS1Q9BX66 1292 aaKnown RBP11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 FUT8Q9BYC5 575 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 MYOTQ9UBF9 498 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 DMGDHQ9UI17 866 aaKnown RBP11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 ZNF835Q9Y2P0 537 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 TSC22D4Q9Y3Q8 395 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 KLF2Q9Y5W3 355 aaPredicted RBP11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 CROCCQ5TZA2 2017 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 ZGRF1Q86YA3 2104 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 ARHGAP10A1A4S6 786 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 LRRC14BA6NHZ5 514 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 WWP2O00308 870 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 PLPP1O14494 284 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 PRRG2O14669 202 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 HNRNPRO43390 633 aaKnown RBP11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 KRT38O76015 456 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 SIX3O95343 332 aaPredicted RBP11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 RBP1P09455 135 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 PTX3P26022 381 aaPredicted RBP11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 RFC3P40938 356 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 BUD31P41223 144 aaPredicted RBP11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 SMSP52788 366 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 ARFIP1P53367 373 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 GPR85P60893 370 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 RPS13P62277 151 aaKnown RBP11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 HSF1Q00613 529 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 TNFRSF17Q02223 184 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 TSNAXIP1Q2TAA8 658 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 GLE1Q53GS7 698 aaKnown RBP11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 RNFT1Q5M7Z0 435 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 BNC2Q6ZN30 1099 aaPredicted RBP11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 C16orf47Q6ZP98 133 aaPredicted RBP11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 Q6ZPB1 254 aaPredicted RBP11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 MDGA2Q7Z553 956 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 GPR180Q86V85 440 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 EID3Q8N140 333 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 ZCCHC7Q8N3Z6 543 aaKnown RBP11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 RNF175Q8N4F7 328 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 PSD4Q8NDX1 1056 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 OR5L2Q8NGL0 311 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 OR8K3Q8NH51 312 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 ATP6V1E2Q96A05 226 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 ISL2Q96A47 359 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 SCYL1Q96KG9 808 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 RASL10BQ96S79 203 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 RPF2Q9H7B2 306 aaKnown RBP11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 IPPKQ9H8X2 491 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 LIN28AQ9H9Z2 209 aaKnown RBP11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 LYARQ9NX58 379 aaKnown RBP11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 TMCO1Q9UM00 188 aa11.48□□□□□ -0.57
CTDNEP1-205ENST00000570828 TMEM200CA6NKL6 621 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 POC1B-GALNT4F8VUJ3 575 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 FGF17O60258 216 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 CDC40O60508 579 aaKnown RBP eCLIP11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 SMIM24O75264 130 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 OR6B1O95007 311 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 CLDN9O95484 217 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 NR2F6P10588 404 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 CNTFP26441 200 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 PTGER1P34995 402 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 SOX3P41225 446 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 MAGEA12P43365 314 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 STT3AP46977 705 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 CCNG1P51959 295 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 HK2P52789 917 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 RNF4P78317 190 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 FOLH1Q04609 750 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 CUL3Q13618 768 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 CYP20A1Q6UW02 462 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 IL20RBQ6UXL0 311 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 NUDT13Q86X67 352 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 OR4N5Q8IXE1 308 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 PLD6Q8N2A8 252 aaKnown RBP11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 ZNF321PQ8N8H1 164 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 L3MBTL4Q8NA19 623 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 ZFP62Q8NB50 900 aaPredicted RBP11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 TANKQ92844 425 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 ANKRD9Q96BM1 317 aaPredicted RBP11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 PHF21BQ96EK2 531 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 RBM18Q96H35 190 aaKnown RBP11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 ART5Q96L15 291 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 NOL11Q9H8H0 719 aaKnown RBP11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 XPR1Q9UBH6 696 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 MEMO1Q9Y316 297 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 RNF11Q9Y3C5 154 aa11.47□□□□□ -0.57
CTDNEP1-205ENST00000570828 A0A087WUV0 522 aaPredicted RBP11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 STX16-NPEPL1H3BU86 382 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 KIF2AO00139 706 aaPredicted RBP11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 ACOT7O00154 380 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms