RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 SHOX2O60902 331 aaPredicted RBP14.15□□□□□ -0.14
RAB40B-203ENST00000570676 CLDN1O95832 211 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 KRT6AP02538 564 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 KRT6BP04259 564 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 PCNAP12004 261 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 HNRNPH1P31943 449 aaKnown RBP14.15□□□□□ -0.14
RAB40B-203ENST00000570676 KRT6CP48668 564 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 SLC26A5P58743 744 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 IFT88Q13099 833 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 UGT3A2Q3SY77 523 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 SGO1Q5FBB7 561 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 FRG2Q64ET8 278 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 VN1R5Q7Z5H4 357 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 CA13Q8N1Q1 262 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 OR7G3Q8NG95 312 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 TWIST2Q8WVJ9 160 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 NR4A3Q92570 626 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 GAL3ST3Q96A11 431 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 REPS1Q96D71 796 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 MTFMTQ96DP5 389 aaKnown RBP14.15□□□□□ -0.14
RAB40B-203ENST00000570676 C5orf34Q96MH7 638 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 FRG2BQ96QU4 278 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 PITHD1Q9GZP4 211 aaPredicted RBP14.15□□□□□ -0.14
RAB40B-203ENST00000570676 NSRP1Q9H0G5 558 aaKnown RBP14.15□□□□□ -0.14
RAB40B-203ENST00000570676 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.15□□□□□ -0.14
RAB40B-203ENST00000570676 ELOVL6Q9H5J4 265 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 NT5DC2Q9H857 520 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 CLK4Q9HAZ1 481 aaKnown RBP14.15□□□□□ -0.14
RAB40B-203ENST00000570676 KCNK13Q9HB14 408 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 PRM3Q9NNZ6 103 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 TEKT2Q9UIF3 430 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 DNAJC15Q9Y5T4 150 aa14.15□□□□□ -0.14
RAB40B-203ENST00000570676 URADA6NGE7 173 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 A8MUI8 341 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 PRAMEF2O60811 474 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 ULK1O75385 1050 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 SKAP2O75563 359 aaPredicted RBP14.14□□□□□ -0.15
RAB40B-203ENST00000570676 TROVE2P10155 538 aaKnown RBP eCLIP14.14□□□□□ -0.15
RAB40B-203ENST00000570676 HTR6P50406 440 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 NEK2P51955 445 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 HK2P52789 917 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 OR4D2P58180 307 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 BTG2P78543 158 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 DDX39BQ13838 428 aaKnown RBP14.14□□□□□ -0.15
RAB40B-203ENST00000570676 PDCD2Q16342 344 aaPredicted RBP14.14□□□□□ -0.15
RAB40B-203ENST00000570676 ACER2Q5QJU3 275 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 ADNP2Q6IQ32 1131 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 SCIMPQ6UWF3 145 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 WDR75Q8IWA0 830 aaKnown RBP14.14□□□□□ -0.15
RAB40B-203ENST00000570676 HOMEZQ8IX15 550 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 LAS2Q8IYD9 372 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 MDS2Q8NDY4 140 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 SELENOMQ8WWX9 145 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 MS4A6EQ96DS6 147 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 THOC1Q96FV9 657 aaKnown RBP14.14□□□□□ -0.15
RAB40B-203ENST00000570676 ZNF354BQ96LW1 612 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 FAM107BQ9H098 131 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 NPHS2Q9NP85 383 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 FARSBQ9NSD9 589 aaKnown RBP14.14□□□□□ -0.15
RAB40B-203ENST00000570676 STMN3Q9NZ72 180 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 VTI1BQ9UEU0 232 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 USH1CQ9Y6N9 552 aa14.14□□□□□ -0.15
RAB40B-203ENST00000570676 TCRBV16S1A1N1A0A5B0 115 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 ANKDD1BA6NHY2 528 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 SAGE2PA6NJ88 616 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 PIP5K1BO14986 540 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 HDAC3O15379 428 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 B4GALT2O60909 372 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 TGDSO95455 350 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 PDYNP01213 254 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 RNH1P13489 461 aaKnown RBP14.13□□□□□ -0.15
RAB40B-203ENST00000570676 MAOAP21397 527 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 DRD4P21917 467 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 GSTM2P28161 218 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 STXBP1P61764 594 aaKnown RBP14.13□□□□□ -0.15
RAB40B-203ENST00000570676 PMP22Q01453 160 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 BTKQ06187 659 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 TUBA3CQ13748 450 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 MEP1AQ16819 746 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 ADPRMQ3LIE5 342 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 C4orf17Q53FE4 359 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 C10orf62Q5T681 223 aaPredicted RBP14.13□□□□□ -0.15
RAB40B-203ENST00000570676 CGB2Q6NT52 195 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 TUBA3EQ6PEY2 450 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 CPLX4Q7Z7G2 160 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 DDIASQ8IXT1 998 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 KIF2BQ8N4N8 673 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 TTLQ8NG68 377 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 HUS1BQ8NHY5 278 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 WDR20Q8TBZ3 569 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 ELP5Q8TE02 316 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 CCT6BQ92526 530 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 PTCHD1Q96NR3 888 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 QRFPRQ96P65 431 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 HBEGFQ99075 208 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 NUF2Q9BZD4 464 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 TUBB1Q9H4B7 451 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 RABEP2Q9H5N1 569 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 NECTIN3Q9NQS3 549 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 ABI3Q9P2A4 366 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms