RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 EPC2Q52LR7 807 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 DNAJC21Q5F1R6 531 aaKnown RBP3.41□□□□□ -1.86
UBR1-211ENST00000569971 XKR3Q5GH77 459 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 SEL1L2Q5TEA6 688 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 SNRNP48Q6IEG0 339 aaKnown RBP3.41□□□□□ -1.86
UBR1-211ENST00000569971 PRSS55Q6UWB4 352 aaPredicted RBP3.41□□□□□ -1.86
UBR1-211ENST00000569971 LRRC31Q6UY01 552 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 KDM7AQ6ZMT4 941 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 KCTD8Q6ZWB6 473 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 CREB3L2Q70SY1 520 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 ZNF677Q86XU0 584 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 AQP12AQ8IXF9 295 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 PEX5LQ8IYB4 626 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 FAM71AQ8IYT1 594 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 SAMD14Q8IZD0 417 aaPredicted RBP3.41□□□□□ -1.86
UBR1-211ENST00000569971 CDK20Q8IZL9 346 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 IQCKQ8N0W5 287 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 GPD1LQ8N335 351 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 RYBPQ8N488 228 aaPredicted RBP3.41□□□□□ -1.86
UBR1-211ENST00000569971 AMER3Q8N944 861 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 TMEM161BQ8NDZ6 487 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 FBXL13Q8NEE6 735 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 LPCAT1Q8NF37 534 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 LMO3Q8TAP4 145 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 GRHL3Q8TE85 626 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 CCDC127Q96BQ5 260 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 SNRNP40Q96DI7 357 aaKnown RBP3.41□□□□□ -1.86
UBR1-211ENST00000569971 LYZL4Q96KX0 146 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 ATP6V1G3Q96LB4 118 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 C12orf42Q96LP6 360 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 TMEM237Q96Q45 408 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 CBWD1Q9BRT8 395 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 SYT11Q9BT88 431 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 TEX13BQ9BXU2 312 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 TMEM117Q9H0C3 514 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 DDX47Q9H0S4 455 aaKnown RBP3.41□□□□□ -1.86
UBR1-211ENST00000569971 THAP2Q9H0W7 228 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 STMN4Q9H169 189 aaPredicted RBP3.41□□□□□ -1.86
UBR1-211ENST00000569971 CENPHQ9H3R5 247 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 TCF7L2Q9NQB0 619 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 SLCO1C1Q9NYB5 712 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 HOXC10Q9NYD6 342 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 UVRAGQ9P2Y5 699 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 MTRF1LQ9UGC7 380 aaKnown RBP3.41□□□□□ -1.86
UBR1-211ENST00000569971 RSPH14Q9UHP6 348 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 FBXW2Q9UKT8 454 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.41□□□□□ -1.86
UBR1-211ENST00000569971 TRIM17Q9Y577 477 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 TRIP12Q14669 1992 aaPredicted RBP3.41□□□□□ -1.86
UBR1-211ENST00000569971 COL4A5P29400 1685 aa3.4□□□□□ -1.86
UBR1-211ENST00000569971 SAA2-SAA4A0A096LPE2 208 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 A0A1W2PPI3 338 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 GOLGA8IPA6NC78 632 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 ZSCAN5CA6NGD5 496 aaPredicted RBP3.4□□□□□ -1.87
UBR1-211ENST00000569971 GOLGA8JA6NMD2 632 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 ANKRD63C9JTQ0 380 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 NDUFAB1O14561 156 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 EXTL3O43909 919 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 VEGFDO43915 354 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 ATP9AO75110 1047 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 KIAA0754O94854 1291 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 NTN1O95631 604 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 CCNE2O96020 404 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 KRT14P02533 472 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 C8orf89P0DMQ9 161 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 DAOP14920 347 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 EPORP19235 508 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 CTNNA2P26232 953 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 CETN2P41208 172 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 RPL21P46778 160 aaKnown RBP3.4□□□□□ -1.87
UBR1-211ENST00000569971 NPBWR1P48145 328 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 CLK1P49759 484 aaKnown RBP3.4□□□□□ -1.87
UBR1-211ENST00000569971 SERPINH1P50454 418 aaKnown RBP3.4□□□□□ -1.87
UBR1-211ENST00000569971 AP3M2P53677 418 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 CDH11P55287 796 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 RWDD2BP57060 319 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 DSCR9P59020 149 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 PRKCEQ02156 737 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 GCNT1Q02742 428 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 CYP24A1Q07973 514 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 TAF10Q12962 218 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 CALCOCO2Q13137 446 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 DOCK1Q14185 1865 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 MESDQ14696 234 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 KIR2DS3Q14952 304 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 STXBP2Q15833 593 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 ODF4Q2M2E3 257 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 FUT11Q495W5 492 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 TTMPQ5BVD1 217 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 ZNF789Q5FWF6 425 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 CEP85LQ5SZL2 805 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 C1orf220Q5T0J3 134 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.4□□□□□ -1.87
UBR1-211ENST00000569971 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 LIN9Q5TKA1 542 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 AGBL2Q5U5Z8 902 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 FAM46CQ5VWP2 391 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 CNSTQ6PJW8 725 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 ZNF852Q6ZMS4 543 aa3.4□□□□□ -1.87
UBR1-211ENST00000569971 C9orf47Q6ZRZ4 202 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms