RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 DBTP11182 482 aaKnown RBP8.34□□□□□ -1.07
LINC00558-201ENST00000569422 MAGP20916 626 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 PTX3P26022 381 aaPredicted RBP8.34□□□□□ -1.07
LINC00558-201ENST00000569422 ACADLP28330 430 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 GPC1P35052 558 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 CRISP3P54108 245 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 BCL7AQ4VC05 210 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 TANGO2Q6ICL3 276 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 PSRC1Q6PGN9 363 aaPredicted RBP8.34□□□□□ -1.07
LINC00558-201ENST00000569422 KLHL17Q6TDP4 642 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 ZNF605Q86T29 641 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 SLC9B2Q86UD5 537 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 LAS2Q8IYD9 372 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 ADGRF3Q8IZF5 1079 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 OR5D16Q8NGK9 328 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 WFIKKN2Q8TEU8 576 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 SH3YL1Q96HL8 342 aaPredicted RBP8.34□□□□□ -1.07
LINC00558-201ENST00000569422 C12orf66Q96MD2 445 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 C17orf62Q9BQA9 187 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 GABARAPL1Q9H0R8 117 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 SLC6A17Q9H1V8 727 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 OR52A5Q9H2C5 316 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 EHD1Q9H4M9 534 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 EPS8L2Q9H6S3 715 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 C11orf16Q9NQ32 467 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 TEX10Q9NXF1 929 aaPredicted RBP8.34□□□□□ -1.07
LINC00558-201ENST00000569422 ATPIF1Q9UII2 106 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 DAPK2Q9UIK4 370 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 PDZK1P1A8MUH7 402 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 PSMD11O00231 422 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 FOXE1O00358 373 aaPredicted RBP8.33□□□□□ -1.08
LINC00558-201ENST00000569422 HOXB3P14651 431 aaPredicted RBP8.33□□□□□ -1.08
LINC00558-201ENST00000569422 KELP23276 732 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 LIPAP38571 399 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 CBX3Q13185 183 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 FAHD1Q6P587 224 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 LRRTM4Q86VH4 590 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 MEX3DQ86XN8 651 aaKnown RBP8.33□□□□□ -1.08
LINC00558-201ENST00000569422 ETFBKMTQ8IXQ9 262 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 LRRC56Q8IYG6 542 aaPredicted RBP8.33□□□□□ -1.08
LINC00558-201ENST00000569422 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.33□□□□□ -1.08
LINC00558-201ENST00000569422 LGALS12Q96DT0 336 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 ZHX1-C8orf76Q96EF9 292 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 CNDP2Q96KP4 475 aaKnown RBP8.33□□□□□ -1.08
LINC00558-201ENST00000569422 EPYCQ99645 322 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 TMEM106CQ9BVX2 250 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 C6orf62Q9GZU0 229 aaPredicted RBP8.33□□□□□ -1.08
LINC00558-201ENST00000569422 SERHL2Q9H4I8 314 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 RERGLQ9H628 205 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 PRSS16Q9NQE7 514 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 GMEB1Q9Y692 573 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 CXorf51AA0A1B0GTR3 108 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 H3BN98 237 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 ZW10O43264 779 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 LCMT2O60294 686 aaKnown RBP8.33□□□□□ -1.08
LINC00558-201ENST00000569422 SNX4O95219 450 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 GASTP01350 101 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 RB1P06400 928 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 HNRNPA1P09651 372 aaKnown RBP eCLIP8.33□□□□□ -1.08
LINC00558-201ENST00000569422 SLC35G4P0C7Q5 338 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 CDK3Q00526 305 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 ZNF33BQ06732 778 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 DNASE1L3Q13609 305 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 MICAQ29983 383 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 RGS21Q2M5E4 152 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 ZNF750Q32MQ0 723 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 PROX2Q3B8N5 592 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 PNCKQ6P2M8 343 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 MZT2AQ6P582 158 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 Q6ZNX1 250 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 DCDC5Q6ZRR9 648 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 RD3Q7Z3Z2 195 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 BCDIN3DQ7Z5W3 292 aaKnown RBP8.33□□□□□ -1.08
LINC00558-201ENST00000569422 C7orf61Q8IZ16 206 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 SVOPQ8N4V2 548 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 OXR1Q8N573 874 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 KNL1Q8NG31 2342 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 WFDC6Q9BQY6 131 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 TGIF2Q9GZN2 237 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 ANKRA2Q9H9E1 313 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 KCNK12Q9HB15 430 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 MS4A12Q9NXJ0 267 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 ANGPT4Q9Y264 503 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 PADI2Q9Y2J8 665 aa8.33□□□□□ -1.08
LINC00558-201ENST00000569422 EFCAB9A8MZ26 197 aa8.32□□□□□ -1.08
LINC00558-201ENST00000569422 CLDN25C9JDP6 229 aa8.32□□□□□ -1.08
LINC00558-201ENST00000569422 C1QTNF3-AMACRE9PGA6 284 aa8.32□□□□□ -1.08
LINC00558-201ENST00000569422 AGRPO00253 132 aa8.32□□□□□ -1.08
LINC00558-201ENST00000569422 HOXC11O43248 304 aaPredicted RBP8.32□□□□□ -1.08
LINC00558-201ENST00000569422 KRT75O95678 551 aa8.32□□□□□ -1.08
LINC00558-201ENST00000569422 TBX6O95947 436 aaPredicted RBP8.32□□□□□ -1.08
LINC00558-201ENST00000569422 ALAS2P22557 587 aa8.32□□□□□ -1.08
LINC00558-201ENST00000569422 RPS3AP61247 264 aaKnown RBP8.32□□□□□ -1.08
LINC00558-201ENST00000569422 MED22Q15528 200 aa8.32□□□□□ -1.08
LINC00558-201ENST00000569422 TRIM16LQ309B1 348 aa8.32□□□□□ -1.08
LINC00558-201ENST00000569422 KHDRBS2Q5VWX1 349 aaKnown RBP8.32□□□□□ -1.08
LINC00558-201ENST00000569422 DCUN1D3Q8IWE4 304 aa8.32□□□□□ -1.08
LINC00558-201ENST00000569422 HDDC3Q8N4P3 179 aa8.32□□□□□ -1.08
LINC00558-201ENST00000569422 TMIEQ8NEW7 156 aa8.32□□□□□ -1.08
LINC00558-201ENST00000569422 GGHQ92820 318 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms