RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 PIK3R1P27986 724 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 TIA1P31483 386 aaKnown RBP eCLIP11.98□□□□□ -0.49
CDT1-203ENST00000569140 ST13P50502 369 aaKnown RBP11.98□□□□□ -0.49
CDT1-203ENST00000569140 ARG2P78540 354 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 PLIN5Q00G26 463 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 MFAP5Q13361 173 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 MPP2Q14168 576 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 ELAVL1Q15717 326 aaKnown RBP11.98□□□□□ -0.49
CDT1-203ENST00000569140 NADK2Q4G0N4 442 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 C6orf163Q5TEZ5 329 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 MRM1Q6IN84 353 aaKnown RBP11.98□□□□□ -0.49
CDT1-203ENST00000569140 TMEM132CQ8N3T6 1108 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 KIF2BQ8N4N8 673 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 SLC5A8Q8N695 610 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 DOK4Q8TEW6 326 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 THAP3Q8WTV1 239 aaPredicted RBP11.98□□□□□ -0.49
CDT1-203ENST00000569140 CHTF18Q8WVB6 975 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 TWIST2Q8WVJ9 160 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 DAZLQ92904 295 aaKnown RBP11.98□□□□□ -0.49
CDT1-203ENST00000569140 UCN3Q969E3 161 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 NCLNQ969V3 563 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 ANKRD9Q96BM1 317 aaPredicted RBP11.98□□□□□ -0.49
CDT1-203ENST00000569140 ARL8AQ96BM9 186 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 PPWD1Q96BP3 646 aaKnown RBP11.98□□□□□ -0.49
CDT1-203ENST00000569140 OR8D2Q9GZM6 311 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 MMP25Q9NPA2 562 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 ABI3Q9P2A4 366 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 MCM8Q9UJA3 840 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 TRAF6Q9Y4K3 522 aa11.98□□□□□ -0.49
CDT1-203ENST00000569140 ATMQ13315 3056 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 WASHC1A8K0Z3 465 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 TMEM114B3SHH9 223 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 B8ZZF3 427 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 PIP5K1BO14986 540 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 PGRMC2O15173 223 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 ITM2AO43736 263 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 SEC22BO75396 215 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 ERAL1O75616 437 aaKnown RBP11.97□□□□□ -0.49
CDT1-203ENST00000569140 RSL1D1O76021 490 aaKnown RBP11.97□□□□□ -0.49
CDT1-203ENST00000569140 IL3P08700 152 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 ANXA4P09525 319 aaPredicted RBP11.97□□□□□ -0.49
CDT1-203ENST00000569140 ALOX15P16050 662 aaPredicted RBP11.97□□□□□ -0.49
CDT1-203ENST00000569140 CD97P48960 835 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 CLCN2P51788 898 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 ABCE1P61221 599 aaKnown RBP11.97□□□□□ -0.49
CDT1-203ENST00000569140 STX3Q13277 289 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 GALNTL6Q49A17 601 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 AGBL2Q5U5Z8 902 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 HPS6Q86YV9 775 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 CLYBLQ8N0X4 340 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 MMP21Q8N119 569 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 B3GNT7Q8NFL0 401 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 OR14A16Q8NHC5 309 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 TLCD1Q96CP7 247 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 KLHL29Q96CT2 875 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 VMP1Q96GC9 406 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 RBM18Q96H35 190 aaKnown RBP11.97□□□□□ -0.49
CDT1-203ENST00000569140 CNPPD1Q9BV87 410 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 DEFB126Q9BYW3 111 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.97□□□□□ -0.49
CDT1-203ENST00000569140 SLAMF7Q9NQ25 335 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 PLA2G3Q9NZ20 509 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 COPS7AQ9UBW8 275 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 VTI1BQ9UEU0 232 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 ANAPC2Q9UJX6 822 aa11.97□□□□□ -0.49
CDT1-203ENST00000569140 MED13Q9UHV7 2174 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 C1orf226A1L170 272 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 GPR75O95800 540 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 DHRS4L1P0CG22 281 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 NT5EP21589 574 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 STT3AP46977 705 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 SLC1A6P48664 564 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 RPL38P63173 70 aaKnown RBP11.96□□□□□ -0.49
CDT1-203ENST00000569140 RAE1P78406 368 aaKnown RBP11.96□□□□□ -0.49
CDT1-203ENST00000569140 ZNF763Q0D2J5 394 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 PDCD2Q16342 344 aaPredicted RBP11.96□□□□□ -0.49
CDT1-203ENST00000569140 MEP1AQ16819 746 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 SLC6A19Q695T7 634 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 TRIM46Q7Z4K8 759 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 ZNF605Q86T29 641 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 CRLF3Q8IUI8 442 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 BEST3Q8N1M1 668 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 RBMXL3Q8N7X1 1067 aaKnown RBP11.96□□□□□ -0.49
CDT1-203ENST00000569140 C7orf57Q8NEG2 295 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 OR4K14Q8NGD5 310 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 DNAJB14Q8TBM8 379 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 C16orf78Q8WTQ4 265 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 TM4SF18Q96CE8 201 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 ATP6V1G3Q96LB4 118 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 PPP1R36Q96LQ0 422 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 ZNF354BQ96LW1 612 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 PELOQ9BRX2 385 aaKnown RBP11.96□□□□□ -0.49
CDT1-203ENST00000569140 TRIM4Q9C037 500 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 ACBD3Q9H3P7 528 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 CDCP1Q9H5V8 836 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 ZNF395Q9H8N7 513 aaPredicted RBP11.96□□□□□ -0.49
CDT1-203ENST00000569140 LRTM1Q9HBL6 345 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 C1orf109Q9NX04 203 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 ANKRD10Q9NXR5 420 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 STMN3Q9NZ72 180 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms