RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 BAG1Q99933 345 aaPredicted RBP11.46□□□□□ -0.57
SNX29-207ENST00000568949 EPB41L4BQ9H329 900 aa11.46□□□□□ -0.57
SNX29-207ENST00000568949 PROK2Q9HC23 129 aa11.46□□□□□ -0.57
SNX29-207ENST00000568949 HOMER3Q9NSC5 361 aa11.46□□□□□ -0.57
SNX29-207ENST00000568949 IARS2Q9NSE4 1012 aaKnown RBP11.46□□□□□ -0.57
SNX29-207ENST00000568949 SLC22A14Q9Y267 594 aa11.46□□□□□ -0.57
SNX29-207ENST00000568949 C15orf38-AP3S2A0A0A6YYH1 394 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 MYOCOSA0A1B0GUC4 107 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 MBD3L4A6NDZ8 208 aaPredicted RBP11.45□□□□□ -0.58
SNX29-207ENST00000568949 MBD3L3A6NE82 208 aaPredicted RBP11.45□□□□□ -0.58
SNX29-207ENST00000568949 MBD3L5A6NJ08 208 aaPredicted RBP11.45□□□□□ -0.58
SNX29-207ENST00000568949 KDM4EB2RXH2 506 aaPredicted RBP11.45□□□□□ -0.58
SNX29-207ENST00000568949 EEF1E1-BLOC1S5C9J1V9 151 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 EEF1E1O43324 174 aaKnown RBP11.45□□□□□ -0.58
SNX29-207ENST00000568949 ABCB7O75027 752 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 CLEC3AO75596 197 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 ETHE1O95571 254 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 C1QAP02745 245 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 C1GALT1C1LP0DN25 315 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 GABRB3P28472 473 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 MAGEA3P43357 314 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 TRPC1P48995 793 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 VPS41P49754 854 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 PLA2G16P53816 162 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 DUSP8Q13202 625 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 PDAP1Q13442 181 aaKnown RBP11.45□□□□□ -0.58
SNX29-207ENST00000568949 POU4F3Q15319 338 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 TRIP13Q15645 432 aaPredicted RBP11.45□□□□□ -0.58
SNX29-207ENST00000568949 RBM20Q5T481 1227 aaKnown RBP11.45□□□□□ -0.58
SNX29-207ENST00000568949 TRIM40Q6P9F5 258 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 SBSNQ6UWP8 590 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 TMIGD1Q6UXZ0 262 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 MBD3L2Q8NHZ7 208 aaPredicted RBP11.45□□□□□ -0.58
SNX29-207ENST00000568949 CCT6BQ92526 530 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 PIGTQ969N2 578 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 PDLIM5Q96HC4 596 aaKnown RBP11.45□□□□□ -0.58
SNX29-207ENST00000568949 WDR83Q9BRX9 315 aaKnown RBP11.45□□□□□ -0.58
SNX29-207ENST00000568949 PITHD1Q9GZP4 211 aaPredicted RBP11.45□□□□□ -0.58
SNX29-207ENST00000568949 REXO4Q9GZR2 422 aaKnown RBP11.45□□□□□ -0.58
SNX29-207ENST00000568949 PRDM14Q9GZV8 571 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 NT5DC2Q9H857 520 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 LYRM4Q9HD34 91 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 IKBKGQ9Y6K9 419 aa11.45□□□□□ -0.58
SNX29-207ENST00000568949 SH3D21A4FU49 640 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 INAFM1C9JVW0 142 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 FGGP02679 453 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 CCDC175P0C221 793 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 GNAZP19086 355 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 GDF1P27539 372 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 CERS1P27544 350 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 CDKL1Q00532 357 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 PPP1R3AQ16821 1122 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 TBCELQ5QJ74 424 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 PRAMEF20Q5VT98 475 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 VASNQ6EMK4 673 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 ABHD17CQ6PCB6 329 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 SLCO4C1Q6ZQN7 724 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 SYDE1Q6ZW31 735 aaPredicted RBP11.44□□□□□ -0.58
SNX29-207ENST00000568949 KRT78Q8N1N4 520 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 AGGF1Q8N302 714 aaeCLIP11.44□□□□□ -0.58
SNX29-207ENST00000568949 NTNG2Q96CW9 530 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 SENP5Q96HI0 755 aaPredicted RBP11.44□□□□□ -0.58
SNX29-207ENST00000568949 SIGLEC10Q96LC7 697 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 Q96MF0 132 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 JSRP1Q96MG2 331 aaPredicted RBP11.44□□□□□ -0.58
SNX29-207ENST00000568949 RUNDC3BQ96NL0 473 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 DESI2Q9BSY9 194 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 COPS7BQ9H9Q2 264 aaPredicted RBP11.44□□□□□ -0.58
SNX29-207ENST00000568949 CALHM2Q9HA72 323 aa11.44□□□□□ -0.58
SNX29-207ENST00000568949 CNOT11Q9UKZ1 510 aaKnown RBP11.44□□□□□ -0.58
SNX29-207ENST00000568949 CHCHD2Q9Y6H1 151 aaPredicted RBP11.44□□□□□ -0.58
SNX29-207ENST00000568949 ANKRD33BA6NCL7 494 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 ANKDD1BA6NHY2 528 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 GOLGA8MH3BSY2 632 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 CASKO14936 926 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 SMAD7O15105 426 aaKnown RBP11.43□□□□□ -0.58
SNX29-207ENST00000568949 LDB3O75112 727 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 TRIM3O75382 744 aaPredicted RBP11.43□□□□□ -0.58
SNX29-207ENST00000568949 TBX6O95947 436 aaPredicted RBP11.43□□□□□ -0.58
SNX29-207ENST00000568949 KRT14P02533 472 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 AHSGP02765 367 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 IGKV3-11P04433 115 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 FBXO45P0C2W1 286 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 COX7A2P14406 83 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 SERPINB3P29508 390 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 HNMTP50135 292 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 AGFG1P52594 562 aaKnown RBP11.43□□□□□ -0.58
SNX29-207ENST00000568949 TGM3Q08188 693 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 SLBPQ14493 270 aaKnown RBP eCLIP11.43□□□□□ -0.58
SNX29-207ENST00000568949 KCTD19Q17RG1 926 aaPredicted RBP11.43□□□□□ -0.58
SNX29-207ENST00000568949 NHSL2Q5HYW2 709 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 GALNT7Q86SF2 657 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 TMEM139Q8IV31 216 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 CNTN4Q8IWV2 1026 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 C9orf40Q8IXQ3 194 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 VWA5B2Q8N398 1253 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 OR10G3Q8NGC4 313 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 ANKRD7Q92527 254 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 ZNF597Q96LX8 424 aa11.43□□□□□ -0.58
SNX29-207ENST00000568949 TRIB1Q96RU8 372 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms