RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 THOC1Q96FV9 657 aaKnown RBP15.71■□□□□ 0.11
COMMD4-224ENST00000568877 VPS50Q96JG6 964 aa15.71■□□□□ 0.11
COMMD4-224ENST00000568877 ZNF317Q96PQ6 595 aaPredicted RBP15.71■□□□□ 0.11
COMMD4-224ENST00000568877 NPHS2Q9NP85 383 aa15.71■□□□□ 0.11
COMMD4-224ENST00000568877 P4HTMQ9NXG6 502 aa15.71■□□□□ 0.11
COMMD4-224ENST00000568877 CES1P1Q9UKY3 287 aa15.71■□□□□ 0.11
COMMD4-224ENST00000568877 NUP210LQ5VU65 1888 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 SYNDIG1LA6NDD5 238 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 G6PDP11413 515 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 DDCP20711 480 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 ASMTP46597 345 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 OR4D2P58180 307 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 IGLV3-21P80748 117 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-224ENST00000568877 ID2Q02363 134 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 EEF1A2Q05639 463 aaKnown RBP15.7■□□□□ 0.1
COMMD4-224ENST00000568877 BIKQ13323 160 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 ATP1A4Q13733 1029 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 SERTAD2Q14140 314 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 LSM12Q3MHD2 195 aaKnown RBP15.7■□□□□ 0.1
COMMD4-224ENST00000568877 SPATA19Q7Z5L4 167 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 CPEB2Q7Z5Q1 589 aaKnown RBP15.7■□□□□ 0.1
COMMD4-224ENST00000568877 OR11G2Q8NGC1 345 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 OR4K14Q8NGD5 310 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 CLHC1Q8NHS4 586 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 RFWD2Q8NHY2 731 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 OR52B2Q96RD2 323 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 EBF4Q9BQW3 602 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 SIKE1Q9BRV8 207 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 ALOXE3Q9BYJ1 711 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 TRIM55Q9BYV6 548 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 EHD3Q9NZN3 535 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 PSME2Q9UL46 239 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 EXO1Q9UQ84 846 aaKnown RBP15.7■□□□□ 0.1
COMMD4-224ENST00000568877 POLHQ9Y253 713 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 IGF2RP11717 2491 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 CHD8Q9HCK8 2581 aa15.7■□□□□ 0.1
COMMD4-224ENST00000568877 URB1O60287 2271 aaKnown RBP15.69■□□□□ 0.1
COMMD4-224ENST00000568877 IGHV3-20A0A0C4DH32 117 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 A0A1W2PQ72 361 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 TROVE2P10155 538 aaKnown RBP eCLIP15.69■□□□□ 0.1
COMMD4-224ENST00000568877 COX6A1P12074 109 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 PIK3R1P27986 724 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 DIO3P55073 304 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 CXADRP78310 365 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 ACTN3Q08043 901 aaPredicted RBP15.69■□□□□ 0.1
COMMD4-224ENST00000568877 PTGR1Q14914 329 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 ST3GAL2Q16842 350 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 SFT2D3Q587I9 215 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 SNRNP27Q8WVK2 155 aaKnown RBP15.69■□□□□ 0.1
COMMD4-224ENST00000568877 STON2Q8WXE9 905 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 GFM2Q969S9 779 aaKnown RBP15.69■□□□□ 0.1
COMMD4-224ENST00000568877 CHMP6Q96FZ7 201 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 CATSPER2Q96P56 530 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 CCDC28BQ9BUN5 200 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 ZNF700Q9H0M5 742 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 TCF7L2Q9NQB0 619 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 MIEF1Q9NQG6 463 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 C5AR2Q9P296 337 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 DCTN4Q9UJW0 460 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 FBXL4Q9UKA2 621 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 UTS2RQ9UKP6 389 aa15.69■□□□□ 0.1
COMMD4-224ENST00000568877 IGHV1-45A0A0A0MS14 117 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 MYOCOSA0A1B0GUC4 107 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 AKAP10O43572 662 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 ERAL1O75616 437 aaKnown RBP15.68■□□□□ 0.1
COMMD4-224ENST00000568877 LRATO95237 230 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 IFNA16P05015 189 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 ALDOCP09972 364 aaKnown RBP15.68■□□□□ 0.1
COMMD4-224ENST00000568877 LSP1P33241 339 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 XKP51811 444 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 PCOLCEQ15113 449 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 DEFB109BQ30KR1 87 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 CGB2Q6NT52 195 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 NDUFAF7Q7L592 441 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 TICAM1Q8IUC6 712 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 FAM9CQ8IZT9 166 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 EXOSC8Q96B26 276 aaKnown RBP15.68■□□□□ 0.1
COMMD4-224ENST00000568877 KLHL29Q96CT2 875 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 FER1L6-AS2Q96M78 137 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 WDR77Q9BQA1 342 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-224ENST00000568877 REEP4Q9H6H4 257 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 KCNK13Q9HB14 408 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 ADAP2Q9NPF8 381 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 PNO1Q9NRX1 252 aaKnown RBP15.68■□□□□ 0.1
COMMD4-224ENST00000568877 AIG1Q9NVV5 245 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 TAS2R7Q9NYW3 318 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 MAN2B2Q9Y2E5 1009 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 ZNF780BQ9Y6R6 833 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 CFAP47Q6ZTR5 3102 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 CCDC88CQ9P219 2028 aa15.68■□□□□ 0.1
COMMD4-224ENST00000568877 ACACAQ13085 2346 aa15.67■□□□□ 0.1
COMMD4-224ENST00000568877 NSG1A0A0A6YYJ2 146 aa15.67■□□□□ 0.1
COMMD4-224ENST00000568877 A0A0G2JND7 137 aa15.67■□□□□ 0.1
COMMD4-224ENST00000568877 A8MUA0 341 aa15.67■□□□□ 0.1
COMMD4-224ENST00000568877 HPP00738 406 aa15.67■□□□□ 0.1
COMMD4-224ENST00000568877 SLC35E2P0CK97 266 aa15.67■□□□□ 0.1
COMMD4-224ENST00000568877 PCSK2P16519 638 aa15.67■□□□□ 0.1
COMMD4-224ENST00000568877 CSNK2A2P19784 350 aaPredicted RBP15.67■□□□□ 0.1
COMMD4-224ENST00000568877 PRPS1L1P21108 318 aa15.67■□□□□ 0.1
COMMD4-224ENST00000568877 STT3AP46977 705 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms