RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 POGLUT1Q8NBL1 392 aa13.43□□□□□ -0.26
CMTM3-215ENST00000568477 ANKRD9Q96BM1 317 aaPredicted RBP13.43□□□□□ -0.26
CMTM3-215ENST00000568477 PCNX1Q96RV3 2341 aa13.43□□□□□ -0.26
CMTM3-215ENST00000568477 RPF2Q9H7B2 306 aaKnown RBP13.43□□□□□ -0.26
CMTM3-215ENST00000568477 NOL11Q9H8H0 719 aaKnown RBP13.43□□□□□ -0.26
CMTM3-215ENST00000568477 LYARQ9NX58 379 aaKnown RBP13.43□□□□□ -0.26
CMTM3-215ENST00000568477 COPS7AQ9UBW8 275 aa13.43□□□□□ -0.26
CMTM3-215ENST00000568477 SH3BGRL2Q9UJC5 107 aa13.43□□□□□ -0.26
CMTM3-215ENST00000568477 TEX15Q9BXT5 2789 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 A8MVJ9 347 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 FOXE1O00358 373 aaPredicted RBP13.42□□□□□ -0.26
CMTM3-215ENST00000568477 CCL21O00585 134 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 FGF17O60258 216 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 OR2J2O76002 312 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 WISP2O76076 250 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 SNRPAP09012 282 aaKnown RBP13.42□□□□□ -0.26
CMTM3-215ENST00000568477 STT3AP46977 705 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 MEOX1P50221 254 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 CCNG1P51959 295 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 IGLV3-21P80748 117 aaPredicted RBP13.42□□□□□ -0.26
CMTM3-215ENST00000568477 CUL3Q13618 768 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 LGSNQ5TDP6 509 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 GPALPP1Q8IXQ4 340 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 GHDCQ8N2G8 530 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 WDR20Q8TBZ3 569 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 SLC2A12Q8TD20 617 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 SREK1Q8WXA9 508 aaKnown RBP13.42□□□□□ -0.26
CMTM3-215ENST00000568477 ASB15Q8WXK1 588 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 TANKQ92844 425 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 DGAT2Q96PD7 388 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 MRPL57Q9BQC6 102 aaKnown RBP13.42□□□□□ -0.26
CMTM3-215ENST00000568477 TMEM109Q9BVC6 243 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 MRPL46Q9H2W6 279 aaKnown RBP13.42□□□□□ -0.26
CMTM3-215ENST00000568477 EPB41L4BQ9H329 900 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 TIMMDC1Q9NPL8 285 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 HPF1Q9NWY4 346 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 PSD3Q9NYI0 1048 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 MYOTQ9UBF9 498 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 PCTPQ9UKL6 214 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 ERVK-11Q9UQG0 969 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 NBPF19A0A087WUL8 3843 aa13.42□□□□□ -0.26
CMTM3-215ENST00000568477 GOLGA6L10A6NI86 522 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 TMEM200CA6NKL6 621 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 KLRC4-KLRK1H3BQV0 150 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 OR7A17O14581 309 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 TFECO14948 347 aaPredicted RBP13.41□□□□□ -0.26
CMTM3-215ENST00000568477 ASNA1O43681 348 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 DYRK3O43781 588 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 PEX1O43933 1283 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 EEDO75530 441 aaKnown RBP13.41□□□□□ -0.26
CMTM3-215ENST00000568477 BSGP35613 385 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 DCTP40126 519 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 BUD31P41223 144 aaPredicted RBP13.41□□□□□ -0.26
CMTM3-215ENST00000568477 NEK2P51955 445 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 HK2P52789 917 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 HNRNPH2P55795 449 aaKnown RBP13.41□□□□□ -0.26
CMTM3-215ENST00000568477 PLIN5Q00G26 463 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 BIKQ13323 160 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 C3AR1Q16581 482 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 RNFT1Q5M7Z0 435 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 FRG2Q64ET8 278 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 C18orf63Q68DL7 685 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 ZNF787Q6DD87 383 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 TTC19Q6DKK2 380 aaPredicted RBP13.41□□□□□ -0.26
CMTM3-215ENST00000568477 CYP20A1Q6UW02 462 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 C16orf47Q6ZP98 133 aaPredicted RBP13.41□□□□□ -0.26
CMTM3-215ENST00000568477 NUDT13Q86X67 352 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 SULF2Q8IWU5 870 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 OR4N5Q8IXE1 308 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 ZNF321PQ8N8H1 164 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 OR52B6Q8NGF0 335 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 OR5L2Q8NGL0 311 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 OR8K3Q8NH51 312 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 CDK15Q96Q40 435 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 FRG2BQ96QU4 278 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 SERPINI1Q99574 410 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 NTMT1Q9BV86 223 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 ZNF717Q9BY31 904 aaPredicted RBP13.41□□□□□ -0.26
CMTM3-215ENST00000568477 DDX31Q9H8H2 851 aaKnown RBP13.41□□□□□ -0.26
CMTM3-215ENST00000568477 LIN28AQ9H9Z2 209 aaKnown RBP13.41□□□□□ -0.26
CMTM3-215ENST00000568477 PPT2Q9UMR5 302 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 ATG4BQ9Y4P1 393 aa13.41□□□□□ -0.26
CMTM3-215ENST00000568477 ITPR2Q14571 2701 aa13.4□□□□□ -0.26
CMTM3-215ENST00000568477 A0A0A6YYD5 115 aa13.4□□□□□ -0.26
CMTM3-215ENST00000568477 WWP2O00308 870 aa13.4□□□□□ -0.26
CMTM3-215ENST00000568477 RIPK2O43353 540 aa13.4□□□□□ -0.26
CMTM3-215ENST00000568477 OR6B1O95007 311 aa13.4□□□□□ -0.26
CMTM3-215ENST00000568477 SEMA3DO95025 777 aa13.4□□□□□ -0.26
CMTM3-215ENST00000568477 ETHE1O95571 254 aa13.4□□□□□ -0.26
CMTM3-215ENST00000568477 MYZAPP0CAP1 466 aa13.4□□□□□ -0.26
CMTM3-215ENST00000568477 NR2F6P10588 404 aa13.4□□□□□ -0.26
CMTM3-215ENST00000568477 ABOP16442 354 aa13.4□□□□□ -0.26
CMTM3-215ENST00000568477 RNF4P78317 190 aa13.4□□□□□ -0.26
CMTM3-215ENST00000568477 FOLH1Q04609 750 aa13.4□□□□□ -0.26
CMTM3-215ENST00000568477 ZNF844Q08AG5 666 aa13.4□□□□□ -0.26
CMTM3-215ENST00000568477 IFT88Q13099 833 aa13.4□□□□□ -0.26
CMTM3-215ENST00000568477 TRAF3Q13114 568 aa13.4□□□□□ -0.26
CMTM3-215ENST00000568477 CEP85LQ5SZL2 805 aa13.4□□□□□ -0.26
CMTM3-215ENST00000568477 C10orf62Q5T681 223 aaPredicted RBP13.4□□□□□ -0.26
CMTM3-215ENST00000568477 MRM1Q6IN84 353 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms