RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 A3GALT2U3KPV4 340 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 A0A1B0GW55 424 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 HHLA1C9JL84 531 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 MRPS14O60783 128 aaKnown RBP10.42□□□□□ -0.74
PALB2-206ENST00000568219 DUX4L2P0CJ85 424 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 DUX4L3P0CJ86 424 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 DUX4L4P0CJ87 422 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 DUX4L5P0CJ88 424 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 DUX4L6P0CJ89 424 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 DUX4L7P0CJ90 424 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 VIPR1P32241 457 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 RFX2P48378 723 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 DGKGP49619 791 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 OC90Q02509 493 aaPredicted RBP10.42□□□□□ -0.74
PALB2-206ENST00000568219 IHHQ14623 411 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 CBX2Q14781 532 aaPredicted RBP10.42□□□□□ -0.74
PALB2-206ENST00000568219 ALKAL1Q6UXT8 129 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 APH1BQ8WW43 257 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 ISG20Q96AZ6 181 aaKnown RBP10.42□□□□□ -0.74
PALB2-206ENST00000568219 RAD51AP1Q96B01 352 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 SRRQ9GZT4 340 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 IL26Q9NPH9 171 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 BRD7Q9NPI1 651 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 DUX4Q9UBX2 424 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 COL14A1Q05707 1796 aaKnown RBP10.42□□□□□ -0.74
PALB2-206ENST00000568219 TRBV4-1A0A0J9YWV2 114 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 INPPL1O15357 1258 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 CACNG3O60359 315 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 GJB5O95377 273 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 SRPRAP08240 638 aaKnown RBP10.41□□□□□ -0.74
PALB2-206ENST00000568219 POU3F3P20264 500 aaPredicted RBP10.41□□□□□ -0.74
PALB2-206ENST00000568219 ACVR1BP36896 505 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 RNF144AP50876 292 aaPredicted RBP10.41□□□□□ -0.74
PALB2-206ENST00000568219 PUDPQ08623 228 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 GPR162Q16538 588 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 YIF1BQ5BJH7 314 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 Q5BKY6 102 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 MED27Q6P2C8 311 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 ZNF852Q6ZMS4 543 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 MACC1Q6ZN28 852 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 CREB3L2Q70SY1 520 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 ZNF280BQ86YH2 543 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 FOXJ1Q92949 421 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 PEX13Q92968 403 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 USP7Q93009 1102 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 FERD3LQ96RJ6 166 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 MCCC1Q96RQ3 725 aaPredicted RBP10.41□□□□□ -0.74
PALB2-206ENST00000568219 ARHGAP39Q9C0H5 1083 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 KCNK12Q9HB15 430 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 FOLH1BQ9HBA9 442 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 SLC52A3Q9NQ40 469 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 KLHL28Q9NXS3 571 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 IQCMA0A1B0GVH7 501 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 A0A1B0GVM2 712 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 RTCAO00442 366 aaKnown RBP10.41□□□□□ -0.74
PALB2-206ENST00000568219 B4GALT3O60512 393 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 MRPL3P09001 348 aaKnown RBP10.41□□□□□ -0.74
PALB2-206ENST00000568219 POLR2CP19387 275 aaPredicted RBP10.41□□□□□ -0.74
PALB2-206ENST00000568219 IL32P24001 234 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 BDKRB1P46663 353 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 SRP9P49458 86 aaKnown RBP10.41□□□□□ -0.74
PALB2-206ENST00000568219 HBA1P69905 142 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 TAGLNQ01995 201 aaKnown RBP10.41□□□□□ -0.74
PALB2-206ENST00000568219 SNTB2Q13425 540 aaKnown RBP10.41□□□□□ -0.74
PALB2-206ENST00000568219 HSDL2Q6YN16 418 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 OLIG3Q7RTU3 272 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 UBE2Q1Q7Z7E8 422 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 ZBTB44Q8NCP5 570 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 ZNF680Q8NEM1 530 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 TNFAIP8L1Q8WVP5 186 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 THAP7Q9BT49 309 aaPredicted RBP10.41□□□□□ -0.74
PALB2-206ENST00000568219 LSM7Q9UK45 103 aaKnown RBP10.41□□□□□ -0.74
PALB2-206ENST00000568219 NUP50Q9UKX7 468 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 PCDHB7Q9Y5E2 793 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 ENPP4Q9Y6X5 453 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 LAMB2P55268 1798 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.41□□□□□ -0.74
PALB2-206ENST00000568219 GLOD5A6NK44 160 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 ZNF670-ZNF695F2Z2N8 137 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 SRCP12931 536 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 AMD1P17707 334 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 OR1D2P34982 312 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 CLCN7P51798 805 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 SLBPQ14493 270 aaKnown RBP eCLIP10.41□□□□□ -0.74
PALB2-206ENST00000568219 ZNF697Q5TEC3 545 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 NDUFAF5Q5TEU4 345 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 REM2Q8IYK8 340 aaPredicted RBP10.41□□□□□ -0.74
PALB2-206ENST00000568219 CFAP206Q8IYR0 622 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 ZNF366Q8N895 744 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 TESCQ96BS2 214 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 SLC39A13Q96H72 371 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 OR10A4Q9H209 315 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 STARD7Q9NQZ5 370 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 DOCK5Q9H7D0 1870 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 DAPL1A0PJW8 107 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 SH3D21A4FU49 640 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 E7EQ34 232 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 M0R3H8 397 aa10.41□□□□□ -0.74
PALB2-206ENST00000568219 AKAP8O43823 692 aaKnown RBP10.41□□□□□ -0.74
PALB2-206ENST00000568219 TSPAN12O95859 305 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms