RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 ANKRD42Q8N9B4 389 aa12.15□□□□□ -0.46
CNOT1-213ENST00000568158 DNAJB14Q8TBM8 379 aa12.15□□□□□ -0.46
CNOT1-213ENST00000568158 PTPMT1Q8WUK0 201 aaPredicted RBP12.15□□□□□ -0.46
CNOT1-213ENST00000568158 ARL8AQ96BM9 186 aa12.15□□□□□ -0.46
CNOT1-213ENST00000568158 NPAS2Q99743 824 aa12.15□□□□□ -0.46
CNOT1-213ENST00000568158 TRMOQ9BU70 441 aa12.15□□□□□ -0.46
CNOT1-213ENST00000568158 TUBB1Q9H4B7 451 aa12.15□□□□□ -0.46
CNOT1-213ENST00000568158 CDCP1Q9H5V8 836 aa12.15□□□□□ -0.46
CNOT1-213ENST00000568158 ADAP2Q9NPF8 381 aa12.15□□□□□ -0.46
CNOT1-213ENST00000568158 ANAPC2Q9UJX6 822 aa12.15□□□□□ -0.46
CNOT1-213ENST00000568158 TRAF6Q9Y4K3 522 aa12.15□□□□□ -0.46
CNOT1-213ENST00000568158 PTGDR2Q9Y5Y4 395 aa12.15□□□□□ -0.46
CNOT1-213ENST00000568158 BSNQ9UPA5 3926 aa12.15□□□□□ -0.46
CNOT1-213ENST00000568158 BLACEA4D250 179 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 TMEM233B4DJY2 109 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 TM9SF1O15321 606 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 GPR75O95800 540 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 FGF4P08620 206 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 LINC00032P0C843 101 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 DHRS4L1P0CG22 281 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 NR2F6P10588 404 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 AP2B1P63010 937 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 IGLV3-21P80748 117 aaPredicted RBP12.14□□□□□ -0.47
CNOT1-213ENST00000568158 CHI3L2Q15782 390 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 IMPG1Q17R60 797 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 ZNF750Q32MQ0 723 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 UGT3A2Q3SY77 523 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 NDUFAF5Q5TEU4 345 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 SLC6A19Q695T7 634 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 Q6ZSR9 355 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 TRIM46Q7Z4K8 759 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 HPS6Q86YV9 775 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 CRLF3Q8IUI8 442 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 CLYBLQ8N0X4 340 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 TMEM132CQ8N3T6 1108 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 ZNF321PQ8N8H1 164 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 Q8NA96 180 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 APCDD1LQ8NCL9 501 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 B3GNT7Q8NFL0 401 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 PPP1R14CQ8TAE6 165 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 AGR3Q8TD06 166 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 SREK1Q8WXA9 508 aaKnown RBP12.14□□□□□ -0.47
CNOT1-213ENST00000568158 NCLNQ969V3 563 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 TLCD1Q96CP7 247 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 PAIP2Q9BPZ3 127 aaKnown RBP12.14□□□□□ -0.47
CNOT1-213ENST00000568158 EPS8L2Q9H6S3 715 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 LIN28AQ9H9Z2 209 aaKnown RBP12.14□□□□□ -0.47
CNOT1-213ENST00000568158 WDR41Q9HAD4 459 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 ZDHHC2Q9UIJ5 367 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 MCM8Q9UJA3 840 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 ZNF223Q9UK11 482 aaPredicted RBP12.14□□□□□ -0.47
CNOT1-213ENST00000568158 CCL27Q9Y4X3 112 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 PCDHA9Q9Y5H5 950 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 CLCA3PQ9Y6N3 262 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 KALRNO60229 2985 aa12.14□□□□□ -0.47
CNOT1-213ENST00000568158 TLN1Q9Y490 2541 aaKnown RBP12.13□□□□□ -0.47
CNOT1-213ENST00000568158 C17orf105B2RV13 164 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 PYCARD-AS1I3L0S3 204 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 BIRC5O15392 142 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 SLC28A2O43868 658 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 PCDH7O60245 1069 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 PRKNO60260 465 aaPredicted RBP12.13□□□□□ -0.47
CNOT1-213ENST00000568158 LYPLA1O75608 230 aaPredicted RBP12.13□□□□□ -0.47
CNOT1-213ENST00000568158 ZWINTO95229 277 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 WDPCPO95876 746 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 H2AFXP16104 143 aaPredicted RBP12.13□□□□□ -0.47
CNOT1-213ENST00000568158 CASRP41180 1078 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 STT3AP46977 705 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 MLLT10P55197 1068 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 WDR4P57081 412 aaKnown RBP12.13□□□□□ -0.47
CNOT1-213ENST00000568158 TAS2R50P59544 299 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 ACSM2AQ08AH3 577 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 ELAVL1Q15717 326 aaKnown RBP12.13□□□□□ -0.47
CNOT1-213ENST00000568158 ACER2Q5QJU3 275 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 SH2D4BQ5SQS7 431 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 ABHD17BQ5VST6 288 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 KANK2Q63ZY3 851 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 ACSM2BQ68CK6 577 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 Q6ZS92 163 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 RPS19BP1Q86WX3 136 aaKnown RBP12.13□□□□□ -0.47
CNOT1-213ENST00000568158 OR4K14Q8NGD5 310 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 OR2T11Q8NH01 316 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 MGARPQ8TDB4 240 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 C16orf78Q8WTQ4 265 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 THAP3Q8WTV1 239 aaPredicted RBP12.13□□□□□ -0.47
CNOT1-213ENST00000568158 TM9SF4Q92544 642 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 HAS2Q92819 552 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 C11orf24Q96F05 449 aaPredicted RBP12.13□□□□□ -0.47
CNOT1-213ENST00000568158 RBM18Q96H35 190 aaKnown RBP12.13□□□□□ -0.47
CNOT1-213ENST00000568158 ZNF354BQ96LW1 612 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 DGAT2Q96PD7 388 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 EBPLQ9BY08 206 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 DEFB126Q9BYW3 111 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 C20orf27Q9GZN8 174 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 STMN4Q9H169 189 aaPredicted RBP12.13□□□□□ -0.47
CNOT1-213ENST00000568158 EML4Q9HC35 981 aaKnown RBP12.13□□□□□ -0.47
CNOT1-213ENST00000568158 HEY2Q9UBP5 337 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 CES1P1Q9UKY3 287 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 DLGAP4Q9Y2H0 992 aa12.13□□□□□ -0.47
CNOT1-213ENST00000568158 DNAJC15Q9Y5T4 150 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms