RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 RPS13P62277 151 aaKnown RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 IGLV3-21P80748 117 aaPredicted RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 TNFRSF17Q02223 184 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 SRSF11Q05519 484 aaKnown RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 SLAMF1Q13291 335 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 CUL3Q13618 768 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 DDX39BQ13838 428 aaKnown RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 CPSF6Q16630 551 aaKnown RBP eCLIP4.45□□□□□ -1.7
CLK3-219ENST00000567805 C10orf62Q5T681 223 aaPredicted RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 UBAP2Q5T6F2 1119 aaKnown RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 LGSNQ5TDP6 509 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 HIST2H2BCQ6DN03 193 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 CYP20A1Q6UW02 462 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 RPTNQ6XPR3 784 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 HSDL2Q6YN16 418 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 BNC2Q6ZN30 1099 aaPredicted RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 Q6ZPB1 254 aaPredicted RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 GOLGA7Q7Z5G4 137 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 GPR180Q86V85 440 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 MYLK4Q86YV6 388 aaPredicted RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 SIAH3Q8IW03 269 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 IFT20Q8IY31 132 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 CNPY4Q8N129 248 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 SLC34A3Q8N130 599 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 PLD6Q8N2A8 252 aaKnown RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 DEPDC4Q8N2C3 294 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 GHDCQ8N2G8 530 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 RNF175Q8N4F7 328 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 CPSF7Q8N684 471 aaKnown RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 CEP112Q8N8E3 955 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 L3MBTL4Q8NA19 623 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 KIF18AQ8NI77 898 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 WDR20Q8TBZ3 569 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 SLC2A12Q8TD20 617 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 PTPMT1Q8WUK0 201 aaPredicted RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 DCAKDQ8WVC6 231 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 ASB15Q8WXK1 588 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 TANKQ92844 425 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 ATP6V1E2Q96A05 226 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 ANKRD9Q96BM1 317 aaPredicted RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 MTBPQ96DY7 904 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 PHF21BQ96EK2 531 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 CCDC120Q96HB5 630 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 MAGED4Q96JG8 741 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 SCYL1Q96KG9 808 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 ART5Q96L15 291 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 DGAT2Q96PD7 388 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 MTERF1Q99551 399 aaKnown RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 NTMT1Q9BV86 223 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 OR8D2Q9GZM6 311 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 RPF2Q9H7B2 306 aaKnown RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 TIMMDC1Q9NPL8 285 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 ZNF358Q9NW07 568 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 HPF1Q9NWY4 346 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 MYOTQ9UBF9 498 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 XPR1Q9UBH6 696 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 COPS7AQ9UBW8 275 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 ZNF835Q9Y2P0 537 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 ITPR2Q14571 2701 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 AKAP9Q99996 3911 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 NAV2Q8IVL1 2488 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 NCKAP5O14513 1909 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 UNC79Q9P2D8 2635 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 ARHGAP21Q5T5U3 1957 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 A0A0A6YYD5 115 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 TRIM49D1C9J1S8 452 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 NPIPA5E9PKD4 350 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 WWP2O00308 870 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 TFECO14948 347 aaPredicted RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 RIPK2O43353 540 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 PROM1O43490 865 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 PEX1O43933 1283 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 FGF17O60258 216 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 PRKNO60260 465 aaPredicted RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 EEDO75530 441 aaKnown RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 WISP2O76076 250 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 ETHE1O95571 254 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 GPR75O95800 540 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 IGKV3-11P04433 115 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 RPS17P08708 135 aaKnown RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 FAM58BPP0C7Q3 252 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 NR2F6P10588 404 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 ESRRAP11474 423 aaPredicted RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 ALOX15P16050 662 aaPredicted RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 ABOP16442 354 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 TNNI3P19429 210 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 AGAP20933 346 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 COL8A1P27658 744 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 GALNSP34059 522 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 BSGP35613 385 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 ARL1P40616 181 aaPredicted RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 SOX3P41225 446 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 STT3AP46977 705 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 MEOX1P50221 254 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 HK2P52789 917 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 HNRNPH2P55795 449 aaKnown RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 RNF4P78317 190 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 PLIN5Q00G26 463 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 ID2Q02363 134 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms