RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 MRPL24Q96A35 216 aaKnown RBP3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 NTNG2Q96CW9 530 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 JPH2Q9BR39 696 aaPredicted RBP3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 HEXA-AS1Q9H8Q6 139 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 MOB1AQ9H8S9 216 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 NMUR1Q9HB89 426 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 DDX28Q9NUL7 540 aaKnown RBP3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 GTSE1Q9NYZ3 720 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 MTRRQ9UBK8 725 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 APPL1Q9UKG1 709 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 EXOC7Q9UPT5 735 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 STYXL1Q9Y6J8 313 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 DHX29Q7Z478 1369 aaKnown RBP3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 IGLON5A6NGN9 336 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 RPL37AP8A6NKH3 93 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 SLC28A1O00337 649 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 TXNL1O43396 289 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 OR6A2O95222 327 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 HPRP00739 348 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 RENP00797 406 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 LYNP07948 512 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 MMP10P09238 476 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 CPA3P15088 417 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 UGT1A6P19224 532 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 FCARP24071 287 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 RPL9P32969 192 aaKnown RBP3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 COPB2P35606 906 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 ID1P41134 155 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 TKTL1P51854 596 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 PEX3P56589 373 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 YBEYP58557 167 aaPredicted RBP3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 KRTAP10-5P60370 271 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 MS4A2Q01362 244 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 HSPA14Q0VDF9 509 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 TEFQ10587 303 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 NPRL3Q12980 569 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 RPA4Q13156 261 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 DCAF12Q5T6F0 453 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 ZNF841Q6ZN19 808 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 NUFIP2Q7Z417 695 aaKnown RBP3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 POM121L12Q8N7R1 296 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 C4orf32Q8N8J7 132 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 GPATCH11Q8N954 259 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 CSNK1G2-AS1Q8NCQ2 148 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 CHDHQ8NE62 594 aaPredicted RBP3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 OR4A16Q8NH70 328 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 CAPNS2Q96L46 248 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 FOXN4Q96NZ1 517 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 ATP6V0BQ99437 205 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 ADNPQ9H2P0 1102 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 LIME1Q9H400 295 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 JPT2Q9H910 190 aa3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 PRMT8Q9NR22 394 aaPredicted RBP3.79□□□□□ -1.8
SHCBP1-206ENST00000567698 EZRP15311 586 aaKnown RBP3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 ATP6V1B1P15313 513 aa3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 FOSL2P15408 326 aa3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 PGFP49763 221 aa3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 PCK2Q16822 640 aa3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 C2orf76Q3KRA6 126 aa3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 MUC21Q5SSG8 566 aa3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 ALKBH5Q6P6C2 394 aaKnown RBP3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 B3GLCTQ6Y288 498 aa3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 CCDC71Q8IV32 467 aaPredicted RBP3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 FGFRL1Q8N441 504 aa3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 GVQW1Q8N7I0 195 aa3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 OR4F5Q8NH21 305 aa3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 GOLGA5Q8TBA6 731 aa3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 RASL10AQ92737 203 aa3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 SLCO4A1Q96BD0 722 aa3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 CDHR1Q96JP9 859 aa3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 STRADBQ9C0K7 418 aa3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 UBE2TQ9NPD8 197 aaPredicted RBP3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 ZCCHC3Q9NUD5 404 aaKnown RBP3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 TSPAN16Q9UKR8 245 aa3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.78□□□□□ -1.8
SHCBP1-206ENST00000567698 TLR4O00206 839 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 PDHXO00330 501 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 KIAA0513O60268 411 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 VENTXO95231 258 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 MELTFP08582 738 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 TAF6P49848 677 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 LIMK2P53671 638 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 HERV-K104P63124 156 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 ACY1Q03154 408 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 FCHO2Q0JRZ9 810 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 FASTKQ14296 549 aaKnown RBP3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 ECSCRQ19T08 205 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 ODF2Q5BJF6 829 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 PARP8Q8N3A8 854 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 ZNF781Q8N8C0 355 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 ZNF491Q8N8L2 437 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 BANPQ8N9N5 519 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 SPC24Q8NBT2 197 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 RELL2Q8NC24 303 aaPredicted RBP3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 FLVCR1-AS1Q8TAF5 88 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 PCNPQ8WW12 178 aaKnown RBP3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 P3H4Q92791 437 aa3.77□□□□□ -1.81
SHCBP1-206ENST00000567698 ANKRD9Q96BM1 317 aaPredicted RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms