RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 CLEC6AQ6EIG7 209 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 CYP20A1Q6UW02 462 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 PAGE2Q7Z2X7 111 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 HDXQ7Z353 690 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 CLNKQ7Z7G1 428 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 NUDCD3Q8IVD9 361 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 C1orf52Q8N6N3 182 aaKnown RBP12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 NFAM1Q8NET5 270 aaPredicted RBP12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 CHTF18Q8WVB6 975 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 SREK1Q8WXA9 508 aaKnown RBP12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 MIB2Q96AX9 1013 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 ARL8AQ96BM9 186 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 ALOXE3Q9BYJ1 711 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 RNF32Q9H0A6 362 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 PNO1Q9NRX1 252 aaKnown RBP12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 PLA2G3Q9NZ20 509 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 MYO18BQ8IUG5 2567 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 A0A1W2PR48 441 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 TMEM120BA0PK00 339 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 WDR91A4D1P6 747 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 AZIN1O14977 448 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 BIRC5O15392 142 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 LDB3O75112 727 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 MYO1DO94832 1006 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 WDPCPO95876 746 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 SERPINB5P36952 375 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 BUD31P41223 144 aaPredicted RBP12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 BIKQ13323 160 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 SERTAD2Q14140 314 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 ZNF169Q14929 603 aaPredicted RBP12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 ACER2Q5QJU3 275 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 CCNYL2Q5T2Q4 361 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 AGBL2Q5U5Z8 902 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 TMEM132CQ8N3T6 1108 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 SLC5A8Q8N695 610 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 ANKRD42Q8N9B4 389 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 CATSPER1Q8NEC5 780 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 B3GNT7Q8NFL0 401 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 ANKRD9Q96BM1 317 aaPredicted RBP12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 RPF2Q9H7B2 306 aaKnown RBP12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 EML4Q9HC35 981 aaKnown RBP12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 ADAP2Q9NPF8 381 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 ABI3Q9P2A4 366 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 VTI1BQ9UEU0 232 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 PCDHGA10Q9Y5H3 936 aa12.92□□□□□ -0.34
HERPUD1-210ENST00000565966 EML6Q6ZMW3 1958 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 TRAV17A0A0B4J275 112 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 MYOCOSA0A1B0GUC4 107 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 ARHGAP10A1A4S6 786 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 CDK2AP1O14519 115 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 FGF17O60258 216 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 PRKRAO75569 313 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 AIFM1O95831 613 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 IFNA16P05015 189 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 FGF4P08620 206 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 PPP2R1BP30154 601 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 TNFSF10P50591 281 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 CLCN2P51788 898 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 WDR4P57081 412 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 ELAVL1Q15717 326 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 CHI3L2Q15782 390 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 KANK2Q63ZY3 851 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 FCRLBQ6BAA4 426 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 TRIM46Q7Z4K8 759 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 ATCAYQ86WG3 371 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 RPS19BP1Q86WX3 136 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 CRLF3Q8IUI8 442 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 CISD2Q8N5K1 135 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 OR1N1Q8NGS0 311 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 PPP1R14CQ8TAE6 165 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 TANKQ92844 425 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 UCN3Q969E3 161 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 SNRNP40Q96DI7 357 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 APIPQ96GX9 242 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 DEFB126Q9BYW3 111 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.91□□□□□ -0.342e-8■■■□□ 18.7
HERPUD1-210ENST00000565966 TUBB1Q9H4B7 451 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 CDCP1Q9H5V8 836 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 VIPAS39Q9H9C1 493 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 TEX10Q9NXF1 929 aaPredicted RBP12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 PPIEQ9UNP9 301 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 FIS1Q9Y3D6 152 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 TRAF6Q9Y4K3 522 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 CCL27Q9Y4X3 112 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 CLCA3PQ9Y6N3 262 aa12.91□□□□□ -0.34
HERPUD1-210ENST00000565966 OR5H15A6NDH6 313 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 WASHC1A8K0Z3 465 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 TMEM233B4DJY2 109 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 VPS4BO75351 444 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 F10P00742 488 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 SERPINE1P05121 402 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 NR2F6P10588 404 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 TNNI3P19429 210 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 GPR143P51810 404 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 MAPK12P53778 367 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 SLC18A1P54219 525 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 RAE1P78406 368 aaKnown RBP12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 IGLV3-21P80748 117 aaPredicted RBP12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 ID2Q02363 134 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 BTKQ06187 659 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms