RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 VNN2O95498 520 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 KLKB1P03952 638 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 UQCRBP14927 111 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 PSMA2P25787 234 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 EIF3EP60228 445 aaKnown RBP3.98□□□□□ -1.77
LINC00561-201ENST00000565815 OTUD4Q01804 1114 aaKnown RBP3.98□□□□□ -1.77
LINC00561-201ENST00000565815 SLC25A11Q02978 314 aaKnown RBP3.98□□□□□ -1.77
LINC00561-201ENST00000565815 SRSF1Q07955 248 aaKnown RBP eCLIP3.98□□□□□ -1.77
LINC00561-201ENST00000565815 LAMTOR4Q0VGL1 99 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 MED21Q13503 144 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 DMC1Q14565 340 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 PON2Q15165 354 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 TEX44Q53QW1 395 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 EOGTQ5NDL2 527 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 JADE1Q6IE81 842 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 C19orf48Q6RUI8 117 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 PRSS55Q6UWB4 352 aaPredicted RBP3.98□□□□□ -1.77
LINC00561-201ENST00000565815 ANO5Q75V66 913 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 LINGO2Q7L985 606 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 DHDDSQ86SQ9 333 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 CDKL3Q8IVW4 592 aaPredicted RBP3.98□□□□□ -1.77
LINC00561-201ENST00000565815 KIRREL3Q8IZU9 778 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 BEST3Q8N1M1 668 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 KCTD6Q8NC69 237 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 ACTL9Q8TC94 416 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 SLC22A18Q96BI1 424 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 NXPE2Q96DL1 559 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 SERPINI1Q99574 410 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 CCDC106Q9BWC9 280 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 CSTL1Q9H114 145 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 CATSPERBQ9H7T0 1116 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 ZWILCHQ9H900 591 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 CYP3A43Q9HB55 503 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 S100A14Q9HCY8 104 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 DCDC2Q9UHG0 476 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 SESN1Q9Y6P5 492 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 PKD1L2Q7Z442 2459 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 A0A0C4DFX4 3053 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 RPS10-NUDT3A0A1W2PQS6 291 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 TCRBV9S1A1TA0A576 114 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 FAM159BA6NKW6 160 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.98□□□□□ -1.77
LINC00561-201ENST00000565815 DENRO43583 198 aaKnown RBP3.98□□□□□ -1.77
LINC00561-201ENST00000565815 DFNA5O60443 496 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 CST8O60676 142 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 STBD1O95210 358 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 IFNB1P01574 187 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 BPGMP07738 259 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 MMP2P08253 660 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 KRT3P12035 628 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 P4HA1P13674 534 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 GNSP15586 552 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 PSMA4P25789 261 aaKnown RBP3.98□□□□□ -1.77
LINC00561-201ENST00000565815 ARL2P36404 184 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 NR4A2P43354 598 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 NR2C2P49116 596 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 TUFMP49411 452 aaKnown RBP3.98□□□□□ -1.77
LINC00561-201ENST00000565815 ILF2Q12905 390 aaKnown RBP3.98□□□□□ -1.77
LINC00561-201ENST00000565815 SRSF5Q13243 272 aaKnown RBP3.98□□□□□ -1.77
LINC00561-201ENST00000565815 STX3Q13277 289 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 RUNX3Q13761 415 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 FASTKD3Q14CZ7 662 aaKnown RBP3.98□□□□□ -1.77
LINC00561-201ENST00000565815 BOLA3Q53S33 107 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 C1orf146Q5VVC0 180 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 IRAK1BP1Q5VVH5 260 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 LYSMD4Q5XG99 296 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 RFWD3Q6PCD5 774 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 FJX1Q86VR8 437 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 ZC3HC1Q86WB0 502 aaKnown RBP3.98□□□□□ -1.77
LINC00561-201ENST00000565815 NUDCD3Q8IVD9 361 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 POC5Q8NA72 575 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 SCCPDHQ8NBX0 429 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 GSDMBQ8TAX9 411 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 PPP4R1Q8TF05 950 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 ING5Q8WYH8 240 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 CDKL2Q92772 493 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 ITFG2Q969R8 447 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 CEP295NLQ96MC4 621 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 MCEEQ96PE7 176 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 FERMT1Q9BQL6 677 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 TMEM121Q9BTD3 319 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 DNAI2Q9GZS0 605 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 POLR3FQ9H1D9 316 aaPredicted RBP3.98□□□□□ -1.77
LINC00561-201ENST00000565815 NXF3Q9H4D5 531 aaKnown RBP3.98□□□□□ -1.77
LINC00561-201ENST00000565815 CNGB3Q9NQW8 809 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 MBNL1Q9NR56 388 aaKnown RBP3.98□□□□□ -1.77
LINC00561-201ENST00000565815 RAB26Q9ULW5 256 aa3.98□□□□□ -1.77
LINC00561-201ENST00000565815 HBS1LQ9Y450 684 aaKnown RBP3.98□□□□□ -1.77
LINC00561-201ENST00000565815 ARID2Q68CP9 1835 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 TICRRQ7Z2Z1 1910 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 SDR42E2A6NKP2 422 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 HACD1B0YJ81 288 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 TMEM114B3SHH9 223 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 SLCO1B7G3V0H7 640 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 MS4A18H0YCH9 400 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 K7ERI5 159 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 OVOL3O00110 214 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 SOCS2O14508 198 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 SPRY1O43609 319 aaPredicted RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 TIMM44O43615 452 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms