RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 SPANXN3Q5MJ09 141 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 CASC4Q6P4E1 433 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 SDCCAG8Q86SQ7 713 aaPredicted RBP8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 LRRC25Q8N386 305 aaPredicted RBP8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 MPP5Q8N3R9 675 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 TBC1D19Q8N5T2 526 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 MFSD9Q8NBP5 474 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 NOA1Q8NC60 698 aaKnown RBP8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 ZNF740Q8NDX6 193 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 IGFBPL1Q8WX77 278 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 DAZLQ92904 295 aaKnown RBP8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 UCN3Q969E3 161 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 JSRP1Q96MG2 331 aaPredicted RBP8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 ZFP3Q96NJ6 502 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 QRFPRQ96P65 431 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 TM9SF2Q99805 663 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 SHARPINQ9H0F6 387 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 P2RY12Q9H244 342 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 DPH5Q9H2P9 285 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 ZNF703Q9H7S9 590 aaPredicted RBP8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 TREX1Q9NSU2 369 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 CATSPERZQ9NTU4 200 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 PIH1D1Q9NWS0 290 aaKnown RBP8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 SYBUQ9NX95 663 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 KLHL28Q9NXS3 571 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 PSD3Q9NYI0 1048 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 GRHL1Q9NZI5 618 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 CNIH4Q9P003 139 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 SLC2A6Q9UGQ3 507 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 TEX264Q9Y6I9 313 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 CLCA3PQ9Y6N3 262 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 MEGF8Q7Z7M0 2845 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 USF3Q68DE3 2245 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 SYNDIG1LA6NDD5 238 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 URADA6NGE7 173 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 H3BMM5 538 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 GOLGA8MH3BSY2 632 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 SNPHO15079 494 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 NDUFS4O43181 175 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 C1QAP02745 245 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 SERPIND1P05546 499 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 PGAM1P18669 254 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 RPS3P23396 243 aaKnown RBP eCLIP8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 GDF1P27539 372 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 HK2P52789 917 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 SLC7A5Q01650 507 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 RGS1Q08116 209 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 DHX9Q08211 1270 aaKnown RBP8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 FAM27E3Q08E93 113 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 FOXF2Q12947 444 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 SEMA3AQ14563 771 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 UBAP2Q5T6F2 1119 aaKnown RBP8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 VASNQ6EMK4 673 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 MRNIPQ6NTE8 343 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 C12orf54Q6X4T0 127 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 SH2D5Q6ZV89 423 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 MILR1Q7Z6M3 343 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 LDB1Q86U70 411 aaPredicted RBP8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 C17orf64Q86WR6 236 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 RELL1Q8IUW5 271 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 PALM2Q8IXS6 379 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 LRRC56Q8IYG6 542 aaPredicted RBP8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 CNPY4Q8N129 248 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 GPATCH11Q8N954 259 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 MORN4Q8NDC4 146 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 OR8K3Q8NH51 312 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 SGMS2Q8NHU3 365 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 FBXO25Q8TCJ0 367 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 ZPLD1Q8TCW7 415 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 PYROXD1Q8WU10 500 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 ART5Q96L15 291 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 ANGPTL4Q9BY76 406 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 SH2D2AQ9NP31 389 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 CCDC177Q9NQR7 707 aaPredicted RBP8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 DMGDHQ9UI17 866 aaKnown RBP8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 MAD1L1Q9Y6D9 718 aa8.28□□□□□ -1.08
VPS9D1-205ENST00000565452 PKD1L1Q8TDX9 2849 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 MSTNO14793 375 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 OR1F1O43749 312 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 ACSL3O95573 720 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 IFNA16P05015 189 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 PGRP06401 933 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 ZNF888P0CJ79 500 aaPredicted RBP8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 CYP4B1P13584 511 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 OGNP20774 298 aaKnown RBP8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 NMBRP28336 390 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 FMO4P31512 558 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 TERF1P54274 439 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 MTTPP55157 894 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 HSD17B7P56937 341 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 RNF4P78317 190 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 CRADDP78560 199 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 PDIA2Q13087 525 aaKnown RBP8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 SLC13A2Q13183 592 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 THOC5Q13769 683 aaKnown RBP8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 GBX1Q14549 363 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 SLMAPQ14BN4 828 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 ELAVL1Q15717 326 aaKnown RBP8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 MPEG1Q2M385 716 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 PIGGQ5H8A4 983 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms