RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 MMABQ96EY8 250 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-205ENST00000564899 ZNF764Q96H86 408 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-205ENST00000564899 OR52E6Q96RD3 313 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 CSF3RQ99062 836 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 CMKLR1Q99788 373 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 DUSP26Q9BV47 211 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 BHLHE41Q9C0J9 482 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-205ENST00000564899 SLC7A5P2Q9GIP4 190 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 RMND5AQ9H871 391 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 WDR41Q9HAD4 459 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 EFCAB1Q9HAE3 211 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.46□□□□□ -0.73
SF3B3-205ENST00000564899 FAM120CQ9NX05 1096 aaKnown RBP10.46□□□□□ -0.73
SF3B3-205ENST00000564899 MS4A12Q9NXJ0 267 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 EHD3Q9NZN3 535 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 KCMF1Q9P0J7 381 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 HCN3Q9P1Z3 774 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 DHCR7Q9UBM7 475 aaKnown RBP10.46□□□□□ -0.73
SF3B3-205ENST00000564899 CLCA2Q9UQC9 943 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 LOXL2Q9Y4K0 774 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 PCDHA9Q9Y5H5 950 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 MDC1Q14676 2089 aaKnown RBP10.46□□□□□ -0.74
SF3B3-205ENST00000564899 KIF26BQ2KJY2 2108 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 A0A1B0GX78 115 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 H0YIG0 161 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 DSCR3O14972 297 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 POLR1CO15160 346 aaPredicted RBP10.45□□□□□ -0.74
SF3B3-205ENST00000564899 PROM1O43490 865 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 CHST10O43529 356 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 TBX19O60806 448 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 CSO75390 466 aaKnown RBP10.45□□□□□ -0.74
SF3B3-205ENST00000564899 SCRG1O75711 98 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 FGF5P12034 268 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 CCL4P13236 92 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 ALAS2P22557 587 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 PTPN4P29074 926 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 WNT3P56703 355 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 PHC1P78364 1004 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 MAT1AQ00266 395 aaKnown RBP10.45□□□□□ -0.74
SF3B3-205ENST00000564899 MC2RQ01718 297 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 ACTN3Q08043 901 aaPredicted RBP10.45□□□□□ -0.74
SF3B3-205ENST00000564899 NFYCQ13952 458 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 IL11RAQ14626 422 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 MAPKAPK3Q16644 382 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 PAGE3Q5JUK9 113 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 ANXA8L1Q5VT79 327 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 BMPERQ8N8U9 685 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 FAM47BQ8NA70 645 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 FBXO27Q8NI29 283 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 ADAMTS18Q8TE60 1221 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 UCN3Q969E3 161 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 EXOSC8Q96B26 276 aaKnown RBP10.45□□□□□ -0.74
SF3B3-205ENST00000564899 SLC7A6OSQ96CW6 309 aaPredicted RBP10.45□□□□□ -0.74
SF3B3-205ENST00000564899 DEPDC7Q96QD5 511 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 CTRCQ99895 268 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 ACTR5Q9H9F9 607 aaPredicted RBP10.45□□□□□ -0.74
SF3B3-205ENST00000564899 CLK4Q9HAZ1 481 aaKnown RBP10.45□□□□□ -0.74
SF3B3-205ENST00000564899 APMAPQ9HDC9 416 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 C5AR2Q9P296 337 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 UTS2RQ9UKP6 389 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 CDC14AQ9UNH5 594 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 MAU2Q9Y6X3 613 aa10.45□□□□□ -0.74
SF3B3-205ENST00000564899 USP9XQ93008 2570 aaPredicted RBP10.45□□□□□ -0.74
SF3B3-205ENST00000564899 GLOD5A6NK44 160 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 B4E171 279 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 GYG2O15488 501 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 PDPK1O15530 556 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 SLC28A2O43868 658 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 WISP1O95388 367 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 TIAF1O95411 115 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 KRT16P08779 473 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 HBQ1P09105 142 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 ATXN8OSP0DMR3 200 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 RNH1P13489 461 aaKnown RBP10.44□□□□□ -0.74
SF3B3-205ENST00000564899 ITGAXP20702 1163 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 EFNA1P20827 205 aaPredicted RBP10.44□□□□□ -0.74
SF3B3-205ENST00000564899 FBLP22087 321 aaKnown RBP10.44□□□□□ -0.74
SF3B3-205ENST00000564899 TSPAN7P41732 249 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 OR1D4P47884 311 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 SLC25A3Q00325 362 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 PLIN5Q00G26 463 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 KCNC4Q03721 635 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 SYT16Q17RD7 645 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 PRSS53Q2L4Q9 553 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 TRMT5Q32P41 509 aaKnown RBP10.44□□□□□ -0.74
SF3B3-205ENST00000564899 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.44□□□□□ -0.74
SF3B3-205ENST00000564899 DNAL1Q4LDG9 190 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 C6orf10Q5SRN2 563 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 C1orf189Q5VU69 101 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 OR52E8Q6IFG1 317 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 RHBDD2Q6NTF9 364 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 PWWP2BQ6NUJ5 590 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 SLC48A1Q6P1K1 146 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 PRMT9Q6P2P2 845 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 C16orf89Q6UX73 402 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 HACD2Q6Y1H2 254 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 DNAJC14Q6Y2X3 702 aaPredicted RBP10.44□□□□□ -0.74
SF3B3-205ENST00000564899 RAB11FIP2Q7L804 512 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 DHDDSQ86SQ9 333 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 ANKRD46Q86W74 232 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms