RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 KATNB1Q9BVA0 655 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ZDHHC3Q9NYG2 299 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 SLC16A8O95907 504 aa19.52■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ZNF8P17098 575 aaPredicted RBP19.52■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ALDH9A1P49189 494 aa19.52■□□□□ 0.72
MAP1LC3B-206ENST00000564844 MPEG1Q2M385 716 aa19.52■□□□□ 0.72
MAP1LC3B-206ENST00000564844 MORN1Q5T089 497 aa19.52■□□□□ 0.72
MAP1LC3B-206ENST00000564844 XKRXQ6PP77 449 aa19.52■□□□□ 0.72
MAP1LC3B-206ENST00000564844 WDR20Q8TBZ3 569 aa19.52■□□□□ 0.72
MAP1LC3B-206ENST00000564844 GEMIN6Q8WXD5 167 aaKnown RBP19.52■□□□□ 0.72
MAP1LC3B-206ENST00000564844 TM9SF4Q92544 642 aa19.52■□□□□ 0.72
MAP1LC3B-206ENST00000564844 RSPO3Q9BXY4 272 aaPredicted RBP19.52■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ENPP4Q9Y6X5 453 aa19.52■□□□□ 0.72
MAP1LC3B-206ENST00000564844 GTPBP1O00178 669 aaKnown RBP19.52■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CH25HO95992 272 aa19.52■□□□□ 0.71
MAP1LC3B-206ENST00000564844 KLK1P06870 262 aa19.52■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ERP29P30040 261 aaKnown RBP19.52■□□□□ 0.71
MAP1LC3B-206ENST00000564844 LAMTOR1Q6IAA8 161 aa19.52■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SLC37A3Q8NCC5 494 aa19.52■□□□□ 0.71
MAP1LC3B-206ENST00000564844 DACT3Q96B18 629 aaPredicted RBP19.52■□□□□ 0.71
MAP1LC3B-206ENST00000564844 LRR1Q96L50 414 aa19.52■□□□□ 0.71
MAP1LC3B-206ENST00000564844 MAPKAP1Q9BPZ7 522 aa19.52■□□□□ 0.71
MAP1LC3B-206ENST00000564844 MND1Q9BWT6 205 aa19.52■□□□□ 0.71
MAP1LC3B-206ENST00000564844 MVB12BQ9H7P6 319 aa19.52■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CLEC4AQ9UMR7 237 aa19.52■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CASP8AP2Q9UKL3 1982 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 MYOFQ9NZM1 2061 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 TRAV6A0A075B6T7 132 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ARHGEF33A8MVX0 844 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 PTSQ03393 145 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 DSC1Q08554 894 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 MRPL28Q13084 256 aaKnown RBP19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 FAM205BPQ63HN1 556 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 AGTRAPQ6RW13 159 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 UNC5DQ6UXZ4 953 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 PEX5LQ8IYB4 626 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ZNF740Q8NDX6 193 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 POP5Q969H6 163 aaKnown RBP19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 QRFPRQ96P65 431 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 WRAP53Q9BUR4 548 aaKnown RBP19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ACAT2Q9BWD1 397 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 HDHD2Q9H0R4 259 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 C1GALT1Q9NS00 363 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 EVA1BQ9NVM1 165 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CNOT2Q9NZN8 540 aaKnown RBP19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ZNF282Q9UDV7 671 aaPredicted RBP19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 KNL1Q8NG31 2342 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 DDX5P17844 614 aaKnown RBP19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 POU6F2P78424 691 aaPredicted RBP19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CLEC12AQ5QGZ9 265 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 IL20RBQ6UXL0 311 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 USP50Q70EL3 339 aaPredicted RBP19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 TRIM69Q86WT6 500 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 NEIL2Q969S2 332 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 PPIL3Q9H2H8 161 aaKnown RBP19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ZDHHC6Q9H6R6 413 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 IL20RAQ9UHF4 553 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SH2B3Q9UQQ2 575 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 PCDHB7Q9Y5E2 793 aa19.51■□□□□ 0.71
MAP1LC3B-206ENST00000564844 RECKO95980 971 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 MAPK12P53778 367 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 MLLT1Q03111 559 aaPredicted RBP19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 MAP4K2Q12851 820 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 GPR17Q13304 367 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 HEPACAMQ14CZ8 416 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 LAPTM4BQ86VI4 370 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 FAM20CQ8IXL6 584 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 NANOGP1Q8N7R0 232 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 NRTNQ99748 197 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ABCG4Q9H172 646 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 TRBV5-4A0A0C4DH59 114 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 PRRG1O14668 218 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 MLLT3P42568 568 aaPredicted RBP19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ZNF157P51786 506 aaPredicted RBP19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 RHAGQ02094 409 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SLC30A8Q8IWU4 369 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 TMEM145Q8NBT3 493 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SLC9A6Q92581 669 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 PPCDCQ96CD2 204 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 KCTD7Q96MP8 289 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 GON7Q9BXV9 100 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ANKRA2Q9H9E1 313 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 BEX1Q9HBH7 125 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SLC25A19Q9HC21 320 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SH3D21A4FU49 640 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 C5orf58C9J3I9 102 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ALPPP05187 535 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ZNF250P15622 560 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CTGFP29279 349 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CCND3P30281 292 aaPredicted RBP19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 DCST1Q5T197 706 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 KIAA1841Q6NSI8 718 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ACSM5Q6NUN0 579 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 TECPR1Q7Z6L1 1165 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 LINC01599Q8WXQ3 324 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 UPF1Q92900 1129 aaKnown RBP eCLIP19.5■□□□□ 0.712e-8■■■■■ 29.6
MAP1LC3B-206ENST00000564844 NDUFB11Q9NX14 153 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ING3Q9NXR8 418 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ZNF222Q9UK12 451 aa19.5■□□□□ 0.71
MAP1LC3B-206ENST00000564844 VWA8A3KMH1 1905 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms