RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 SOX3P41225 446 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 RAP1GDS1P52306 607 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 PLGLB1Q02325 96 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 CKAP4Q07065 602 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 CUL3Q13618 768 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 PCBP2Q15366 365 aaKnown RBP eCLIP11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 MROH9Q5TGP6 573 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 ZDHHC24Q6UX98 284 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 ACAD11Q709F0 780 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 RELL1Q8IUW5 271 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 LILRB4Q8NHJ6 448 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 ZNF721Q8TF20 911 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 RND1Q92730 232 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 EXT2Q93063 718 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 TRIM8Q9BZR9 551 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 OR51B5Q9H339 312 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 SACM1LQ9NTJ5 587 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 TMCO1Q9UM00 188 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 CACNA1CQ13936 2221 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 A0A1B0GVC2 190 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 FOXO6A8MYZ6 492 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 RTCAO00442 366 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 BCKDKO14874 412 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 PROM1O43490 865 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 SUSD5O60279 629 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 ETHE1O95571 254 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 GPR75O95800 540 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 IGHG3P01860 377 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 IGKV3-11P04433 115 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 RBP1P09455 135 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 GFAPP14136 432 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 TYK2P29597 1187 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 CHRNB4P30926 498 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 KIR3DL1P43629 444 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 GPR85P60893 370 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 PLIN5Q00G26 463 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 SLC10A1Q14973 349 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 PFKFB4Q16877 469 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 ZNF750Q32MQ0 723 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 GXYLT1Q4G148 440 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 SLC22A10Q63ZE4 541 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 SYT10Q6XYQ8 523 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 CD163Q86VB7 1156 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 ST13P4Q8IZP2 240 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 CENPLQ8N0S6 344 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 FAM109AQ8N4B1 249 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 L3MBTL4Q8NA19 623 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 SLC22A8Q8TCC7 542 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 SDCCAG3Q96C92 435 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 SCYL1Q96KG9 808 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 LURAP1Q96LR2 239 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 TREX2Q9BQ50 279 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 TTTY12Q9BZ98 90 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 DEFB127Q9H1M4 99 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 DDX31Q9H8H2 851 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 ACTR8Q9H981 624 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 LIN28AQ9H9Z2 209 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 WDR41Q9HAD4 459 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 SLC24A3Q9HC58 644 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 DMRT3Q9NQL9 472 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 SNX15Q9NRS6 342 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 DEPPQ9NTK1 212 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 LYARQ9NX58 379 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 DNAJC13O75165 2243 aa11.28□□□□□ -0.6
GTF3C1-204ENST00000564664 A0A096LPK6 155 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 IQANK1A0A1B0GTG1 560 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 OR6C76A6NM76 312 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 PLPP1O14494 284 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 FGF17O60258 216 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 HCN1O60741 890 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 PDE9AO76083 593 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 SNRPB2P08579 225 aaKnown RBP11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 ALOX15P16050 662 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 SERPINB3P29508 390 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 RFC3P40938 356 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 SERPINB8P50452 374 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 TNFRSF17Q02223 184 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 GTF2H2Q13888 395 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 TRADDQ15628 312 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 SPRED3Q2MJR0 410 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 ZNF791Q3KP31 576 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 MRM1Q6IN84 353 aaKnown RBP11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 GTF2H2CQ6P1K8 395 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 CYP20A1Q6UW02 462 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 C16orf47Q6ZP98 133 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 ZNF295-AS1Q8N0V1 137 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 ZNF321PQ8N8H1 164 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 CHTF18Q8WVB6 975 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 KCTD4Q8WVF5 259 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 FBXL20Q96IG2 436 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 GPR78Q96P69 363 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 SERPINI1Q99574 410 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 FUT8Q9BYC5 575 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 IPPKQ9H8X2 491 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 SH2D2AQ9NP31 389 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 ZDHHC18Q9NUE0 388 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 CNIH4Q9P003 139 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 MTRF1LQ9UGC7 380 aaKnown RBP11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 HRH3Q9Y5N1 445 aa11.27□□□□□ -0.61
GTF3C1-204ENST00000564664 ZNF407Q9C0G0 2248 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms