RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 CAMK2DQ13557 499 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 ZNF273Q14593 569 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 PTPRCAPQ14761 206 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 KARSQ15046 597 aaKnown RBP3.46□□□□□ -1.86
CHD9-212ENST00000564641 CCDC92Q53HC0 331 aaPredicted RBP3.46□□□□□ -1.86
CHD9-212ENST00000564641 MFSD14CQ5VZR4 134 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 APOBEC3HQ6NTF7 200 aaKnown RBP3.46□□□□□ -1.86
CHD9-212ENST00000564641 CYB5D1Q6P9G0 228 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 TMEM207Q6UWW9 146 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 MSANTD1Q6ZTZ1 278 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 TMPRSS11FQ6ZWK6 438 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 RUFY3Q7L099 469 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 BZW1Q7L1Q6 419 aaKnown RBP3.46□□□□□ -1.86
CHD9-212ENST00000564641 MARCH9Q86YJ5 346 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 EXD1Q8NHP7 514 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 ZPLD1Q8TCW7 415 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 ATL1Q8WXF7 558 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 CENPTQ96BT3 561 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 RBM41Q96IZ5 413 aaKnown RBP3.46□□□□□ -1.86
CHD9-212ENST00000564641 RMDN2Q96LZ7 410 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 CDRT15Q96T59 188 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 MLPHQ9BV36 600 aaPredicted RBP3.46□□□□□ -1.86
CHD9-212ENST00000564641 THUMPD3Q9BV44 507 aaKnown RBP3.46□□□□□ -1.86
CHD9-212ENST00000564641 KRTAP4-3Q9BYR4 195 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 TRIM7Q9C029 511 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 DNAI2Q9GZS0 605 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 NOL11Q9H8H0 719 aaKnown RBP3.46□□□□□ -1.86
CHD9-212ENST00000564641 TMEM165Q9HC07 324 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 GPR83Q9NYM4 423 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 MTRRQ9UBK8 725 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 SUN2Q9UH99 717 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 BAIAP2L1Q9UHR4 511 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 LEF1Q9UJU2 399 aaPredicted RBP3.46□□□□□ -1.86
CHD9-212ENST00000564641 LIPT1Q9Y234 373 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 CSNK1G3Q9Y6M4 447 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 DOCK2Q92608 1830 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 SSC5DA1L4H1 1573 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 COL4A1P02462 1669 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 MGAMO43451 1857 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 ANXA2P2A6NMY6 339 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 H0YAE9 185 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 H3BQV1 296 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 MGRN1O60291 552 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 STX10O60499 249 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 ATP6V1G2O95670 118 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 OR2T7P0C7T2 308 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 GHRP10912 638 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 LHCGRP22888 699 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 MNDAP41218 407 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 BTDP43251 543 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 TPD52P55327 224 aaPredicted RBP3.45□□□□□ -1.86
CHD9-212ENST00000564641 TMED1Q13445 227 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 MORF4L2Q15014 288 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 EFTUD2Q15029 972 aaKnown RBP eCLIP3.45□□□□□ -1.86
CHD9-212ENST00000564641 LACTB2Q53H82 288 aaPredicted RBP3.45□□□□□ -1.86
CHD9-212ENST00000564641 CDC42EP5Q6NZY7 148 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 FAM198BQ6UWH4 519 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 FRRS1Q6ZNA5 592 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 RTN4RL2Q86UN3 420 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 NLRP14Q86W24 1093 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 FAM228AQ86W67 206 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 ANKRD13CQ8N6S4 541 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 GBP7Q8N8V2 638 aaPredicted RBP3.45□□□□□ -1.86
CHD9-212ENST00000564641 CAMKVQ8NCB2 501 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 OR1L3Q8NH93 324 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 TEKT4Q8WW24 435 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 DYDC1Q8WWB3 177 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 LZICQ8WZA0 190 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 MRPS27Q92552 414 aaKnown RBP3.45□□□□□ -1.86
CHD9-212ENST00000564641 P3H4Q92791 437 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 MR1Q95460 341 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 LINC00615Q96LM1 132 aaPredicted RBP3.45□□□□□ -1.86
CHD9-212ENST00000564641 DEFB118Q96PH6 123 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 NAPGQ99747 312 aaPredicted RBP3.45□□□□□ -1.86
CHD9-212ENST00000564641 NUP58Q9BVL2 599 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 C11orf49Q9H6J7 331 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 GKN1Q9NS71 199 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 C19orf25Q9UFG5 118 aaPredicted RBP3.45□□□□□ -1.86
CHD9-212ENST00000564641 DAPK2Q9UIK4 370 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 C15orf41Q9Y2V0 281 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 DOCK1Q14185 1865 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 A0A0C4DFX4 3053 aa3.45□□□□□ -1.86
CHD9-212ENST00000564641 MROH7-TTC4A0A0A0MT08 1334 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 GAKO14976 1311 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 TRAV34A0A0B4J273 112 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 A0A1B0GVL5 298 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 ANKUB1A6NFN9 424 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 KBTBD13C9JR72 458 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 OR10H2O60403 315 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 E2F6O75461 281 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 TADA2AO75478 443 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 IGHEP01854 428 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 EPB41P11171 864 aaKnown RBP3.44□□□□□ -1.86
CHD9-212ENST00000564641 DESP17661 470 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 PSMA5P28066 241 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 CDC25CP30307 473 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 CSTF2P33240 577 aaKnown RBP eCLIP3.44□□□□□ -1.86
CHD9-212ENST00000564641 ALDH3A2P51648 485 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 NAGLUP54802 743 aa3.44□□□□□ -1.86
CHD9-212ENST00000564641 ELF3P78545 371 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms