RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 PLIN3O60664 434 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 EEDO75530 441 aaKnown RBP12.75□□□□□ -0.37
CNOT1-206ENST00000564557 CRYABP02511 175 aaKnown RBP12.75□□□□□ -0.37
CNOT1-206ENST00000564557 GBAP04062 536 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 PROCP04070 461 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 ENO1P06733 434 aaKnown RBP12.75□□□□□ -0.37
CNOT1-206ENST00000564557 CPA3P15088 417 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 CD96P40200 585 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 CYB561P49447 251 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 MAPK12P53778 367 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 HNRNPH2P55795 449 aaKnown RBP12.75□□□□□ -0.37
CNOT1-206ENST00000564557 MLF1P58340 268 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 ASPHQ12797 758 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 TUBA3CQ13748 450 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 NR6A1Q15406 480 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 INAQ16352 499 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 FHL5Q5TD97 284 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 C18orf63Q68DL7 685 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 TUBA3EQ6PEY2 450 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 HSDL2Q6YN16 418 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 TMEM178AQ8NBL3 297 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 OR5L2Q8NGL0 311 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 FAR1Q8WVX9 515 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 SREK1Q8WXA9 508 aaKnown RBP12.75□□□□□ -0.37
CNOT1-206ENST00000564557 CAVIN3Q969G5 261 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 TMEM125Q96AQ2 219 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 ART5Q96L15 291 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 PELOQ9BRX2 385 aaKnown RBP12.75□□□□□ -0.37
CNOT1-206ENST00000564557 MRPL1Q9BYD6 325 aaKnown RBP12.75□□□□□ -0.37
CNOT1-206ENST00000564557 MID1IP1Q9NPA3 183 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 OLAHQ9NV23 265 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 LRFN1Q9P244 771 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 VPS29Q9UBQ0 182 aa12.75□□□□□ -0.37
CNOT1-206ENST00000564557 ANKUB1A6NFN9 424 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 GLOD5A6NK44 160 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 G3V2L1 256 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 TGFBR3LH3BV60 316 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 MANBAO00462 879 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 FGF17O60258 216 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 ESRRBO95718 433 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 GPR75O95800 540 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 HSD3B1P14060 373 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 ALOX15P16050 662 aaPredicted RBP12.74□□□□□ -0.37
CNOT1-206ENST00000564557 HSD3B2P26439 372 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 PIK3R1P27986 724 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 TPP2P29144 1249 aaPredicted RBP12.74□□□□□ -0.37
CNOT1-206ENST00000564557 DEKP35659 375 aaKnown RBP12.74□□□□□ -0.37
CNOT1-206ENST00000564557 STT3AP46977 705 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 NAGLUP54802 743 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 FOLH1Q04609 750 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 SLC18A2Q05940 514 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 C6orf163Q5TEZ5 329 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 SPINK14Q6IE38 97 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 OR52E8Q6IFG1 317 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 MRM1Q6IN84 353 aaKnown RBP12.74□□□□□ -0.37
CNOT1-206ENST00000564557 SH2D5Q6ZV89 423 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 METTL4Q8N3J2 472 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 GBP7Q8N8V2 638 aaPredicted RBP12.74□□□□□ -0.37
CNOT1-206ENST00000564557 APCDD1LQ8NCL9 501 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 PRR7Q8TB68 274 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 ANKRD9Q96BM1 317 aaPredicted RBP12.74□□□□□ -0.37
CNOT1-206ENST00000564557 SMC6Q96SB8 1091 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 KLHL1Q9NR64 748 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 FARSBQ9NSD9 589 aaKnown RBP12.74□□□□□ -0.37
CNOT1-206ENST00000564557 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.74□□□□□ -0.379e-14■□□□□ 10.9
CNOT1-206ENST00000564557 EMCNQ9ULC0 261 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 ERVK-11Q9UQG0 969 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 ASB4Q9Y574 426 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 NBASA2RRP1 2371 aa12.74□□□□□ -0.37
CNOT1-206ENST00000564557 A0A1B0GTL3 188 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 A0A1W2PR48 441 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 TMPRSS11DO60235 418 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 MAN1A2O60476 641 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 AGFG2O95081 481 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 AIFM1O95831 613 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 UQCRFS1P47985 274 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 ST13P50502 369 aaKnown RBP12.73□□□□□ -0.37
CNOT1-206ENST00000564557 SSR4P51571 173 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 DNAJB13P59910 316 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 CSTF3Q12996 717 aaKnown RBP12.73□□□□□ -0.37
CNOT1-206ENST00000564557 MRPL49Q13405 166 aaKnown RBP12.73□□□□□ -0.37
CNOT1-206ENST00000564557 UBAP2LQ14157 1087 aaKnown RBP12.73□□□□□ -0.37
CNOT1-206ENST00000564557 MAPKAPK3Q16644 382 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 IMPG1Q17R60 797 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 EIF2S3LQ2VIR3 472 aaKnown RBP12.73□□□□□ -0.37
CNOT1-206ENST00000564557 LIPMQ5VYY2 423 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 SLC25A25Q6KCM7 469 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 COMMD6Q7Z4G1 85 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 SRRM1Q8IYB3 904 aaKnown RBP12.73□□□□□ -0.37
CNOT1-206ENST00000564557 ST13P4Q8IZP2 240 aaPredicted RBP12.73□□□□□ -0.37
CNOT1-206ENST00000564557 FAM26EQ8N5C1 309 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 DNAJB8Q8NHS0 232 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 SLC2A12Q8TD20 617 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 PTPMT1Q8WUK0 201 aaPredicted RBP12.73□□□□□ -0.37
CNOT1-206ENST00000564557 PPWD1Q96BP3 646 aaKnown RBP12.73□□□□□ -0.37
CNOT1-206ENST00000564557 APOPT1Q96IL0 206 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 HBEGFQ99075 208 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 NPAS2Q99743 824 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 FAIM2Q9BWQ8 316 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 ZNF717Q9BY31 904 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms