RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 SLC6A16Q9GZN6 736 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 PAIP1Q9H074 479 aaKnown RBP9.23□□□□□ -0.93
UBFD1-203ENST00000564106 RAB33BQ9H082 229 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 RAD21L1Q9H4I0 556 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 NEUROD4Q9HD90 331 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 LYARQ9NX58 379 aaKnown RBP9.23□□□□□ -0.93
UBFD1-203ENST00000564106 EHD3Q9NZN3 535 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 SH3BP4Q9P0V3 963 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 VPS4AQ9UN37 437 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 SNX13Q9Y5W8 968 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 B3GALT1Q9Y5Z6 326 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 GMEB1Q9Y692 573 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 SPTA1P02549 2419 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 HECTD1Q9ULT8 2610 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 FLNCQ14315 2725 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 UBR5O95071 2799 aaPredicted RBP9.22□□□□□ -0.93
UBFD1-203ENST00000564106 TRBV5-3A0A0A0MS03 114 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 GABRR3A8MPY1 467 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 A8MU76 341 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 H0Y3Z8 333 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 ERI3O43414 337 aaKnown RBP9.22□□□□□ -0.93
UBFD1-203ENST00000564106 LCMT2O60294 686 aaKnown RBP9.22□□□□□ -0.93
UBFD1-203ENST00000564106 KRT36O76013 467 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 SCELO95171 688 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 TBX6O95947 436 aaPredicted RBP9.22□□□□□ -0.93
UBFD1-203ENST00000564106 C8BP07358 591 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 IL3P08700 152 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 FAM87AP0C7U9 286 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 LIPCP11150 499 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 HIST1H1TP22492 207 aaPredicted RBP9.22□□□□□ -0.93
UBFD1-203ENST00000564106 MLLT3P42568 568 aaPredicted RBP9.22□□□□□ -0.93
UBFD1-203ENST00000564106 GSK3BP49841 420 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 GFERP55789 205 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 RHDQ02161 417 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 ABHD18Q0P651 414 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 C19orf57Q0VDD7 668 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 EIF3IQ13347 325 aaKnown RBP9.22□□□□□ -0.93
UBFD1-203ENST00000564106 CCNIQ14094 377 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 FXNQ16595 210 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 RUNDC3AQ59EK9 446 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 RABL3Q5HYI8 236 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 TOR1AIP1Q5JTV8 583 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 SNAP47Q5SQN1 464 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 ERICH5Q6P6B1 374 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 ABHD17CQ6PCB6 329 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 ABHD13Q7L211 337 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 TIPARPQ7Z3E1 657 aaKnown RBP9.22□□□□□ -0.93
UBFD1-203ENST00000564106 PACS2Q86VP3 889 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 SPATA24Q86W54 205 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 PLD3Q8IV08 490 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 OR2T12Q8NG77 320 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 OR7A2PQ8NGA2 310 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 GOT1L1Q8NHS2 421 aaPredicted RBP9.22□□□□□ -0.93
UBFD1-203ENST00000564106 NKD1Q969G9 470 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 MS4A6EQ96DS6 147 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 FAM120BQ96EK7 910 aaKnown RBP9.22□□□□□ -0.93
UBFD1-203ENST00000564106 NRTNQ99748 197 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 C17orf62Q9BQA9 187 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 ZNF717Q9BY31 904 aaPredicted RBP9.22□□□□□ -0.93
UBFD1-203ENST00000564106 SPRY4Q9C004 299 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 S100A14Q9HCY8 104 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 SERHLQ9NQF3 203 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 PRDM9Q9NQV7 894 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 C1GALT1Q9NS00 363 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 CMTM6Q9NX76 183 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 MS4A12Q9NXJ0 267 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 VAPAQ9P0L0 249 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 C6orf203Q9P0P8 240 aaPredicted RBP9.22□□□□□ -0.93
UBFD1-203ENST00000564106 EPHA6Q9UF33 1036 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 PCDHB3Q9Y5E6 796 aa9.22□□□□□ -0.93
UBFD1-203ENST00000564106 A0A0A6YYD5 115 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 C1orf226A1L170 272 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 EIF4E1BA6NMX2 242 aaKnown RBP9.21□□□□□ -0.94
UBFD1-203ENST00000564106 FAM220BPB1ANY3 271 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 ARPC2O15144 300 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 DUX1O43812 170 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 GPIP06744 558 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 FAM58BPP0C7Q3 252 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 UMPSP11172 480 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 LAMP1P11279 417 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 PIM1P11309 404 aaPredicted RBP9.21□□□□□ -0.94
UBFD1-203ENST00000564106 LIFP15018 202 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 ANPEPP15144 967 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 CDH3P22223 829 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 PSMA4P25789 261 aaKnown RBP9.21□□□□□ -0.94
UBFD1-203ENST00000564106 GCKP35557 465 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 BUD31P41223 144 aaPredicted RBP9.21□□□□□ -0.94
UBFD1-203ENST00000564106 GPR3P46089 330 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 PLA2G16P53816 162 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 UCNP55089 124 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 MTPNP58546 118 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 GPLD1P80108 840 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 ATP1A1-AS1Q5TC04 95 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 DNAJC14Q6Y2X3 702 aaPredicted RBP9.21□□□□□ -0.94
UBFD1-203ENST00000564106 ARHGAP22Q7Z5H3 698 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 SERPINA11Q86U17 422 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 SAMD14Q8IZD0 417 aaPredicted RBP9.21□□□□□ -0.94
UBFD1-203ENST00000564106 EFCAB3Q8N7B9 438 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 OR4D9Q8NGE8 314 aa9.21□□□□□ -0.94
UBFD1-203ENST00000564106 ZFP28Q8NHY6 868 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms