RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 RNF4P78317 190 aa15.65■□□□□ 0.1
CLK3-210ENST00000563112 IGLV3-21P80748 117 aaPredicted RBP15.65■□□□□ 0.1
CLK3-210ENST00000563112 PLIN5Q00G26 463 aa15.65■□□□□ 0.1
CLK3-210ENST00000563112 TNFRSF17Q02223 184 aa15.65■□□□□ 0.1
CLK3-210ENST00000563112 IFT88Q13099 833 aa15.65■□□□□ 0.1
CLK3-210ENST00000563112 C10orf62Q5T681 223 aaPredicted RBP15.65■□□□□ 0.1
CLK3-210ENST00000563112 MILR1Q7Z6M3 343 aa15.65■□□□□ 0.1
CLK3-210ENST00000563112 SIAH3Q8IW03 269 aa15.65■□□□□ 0.1
CLK3-210ENST00000563112 SLC34A3Q8N130 599 aa15.65■□□□□ 0.1
CLK3-210ENST00000563112 MTFMTQ96DP5 389 aaKnown RBP15.65■□□□□ 0.1
CLK3-210ENST00000563112 MTBPQ96DY7 904 aa15.65■□□□□ 0.1
CLK3-210ENST00000563112 CDK15Q96Q40 435 aa15.65■□□□□ 0.1
CLK3-210ENST00000563112 PELOQ9BRX2 385 aaKnown RBP15.65■□□□□ 0.1
CLK3-210ENST00000563112 DDX31Q9H8H2 851 aaKnown RBP15.65■□□□□ 0.1
CLK3-210ENST00000563112 LIN28AQ9H9Z2 209 aaKnown RBP15.65■□□□□ 0.1
CLK3-210ENST00000563112 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.65■□□□□ 0.1
CLK3-210ENST00000563112 AHSPQ9NZD4 102 aa15.65■□□□□ 0.1
CLK3-210ENST00000563112 PCTPQ9UKL6 214 aa15.65■□□□□ 0.1
CLK3-210ENST00000563112 PPT2Q9UMR5 302 aa15.65■□□□□ 0.1
CLK3-210ENST00000563112 ATG4BQ9Y4P1 393 aa15.65■□□□□ 0.1
CLK3-210ENST00000563112 PROM1O43490 865 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 FAM58BPP0C7Q3 252 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 ALOX15P16050 662 aaPredicted RBP15.64■□□□□ 0.09
CLK3-210ENST00000563112 BSGP35613 385 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 HK2P52789 917 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 HNRNPH2P55795 449 aaKnown RBP15.64■□□□□ 0.09
CLK3-210ENST00000563112 FOLH1Q04609 750 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 C3AR1Q16581 482 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 FRG2Q64ET8 278 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 C18orf63Q68DL7 685 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 ZNF787Q6DD87 383 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 IL20RBQ6UXL0 311 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 RPTNQ6XPR3 784 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 BNC2Q6ZN30 1099 aaPredicted RBP15.64■□□□□ 0.09
CLK3-210ENST00000563112 C16orf47Q6ZP98 133 aaPredicted RBP15.64■□□□□ 0.09
CLK3-210ENST00000563112 MDGA2Q7Z553 956 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 MRGPRGQ86SM5 289 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 PSD4Q8NDX1 1056 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 OR52B6Q8NGF0 335 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 SREK1Q8WXA9 508 aaKnown RBP15.64■□□□□ 0.09
CLK3-210ENST00000563112 CCDC120Q96HB5 630 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 SENP5Q96HI0 755 aaPredicted RBP15.64■□□□□ 0.09
CLK3-210ENST00000563112 FRG2BQ96QU4 278 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 RASL10BQ96S79 203 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 SEMA4BQ9NPR2 832 aaPredicted RBP15.64■□□□□ 0.09
CLK3-210ENST00000563112 ZNF835Q9Y2P0 537 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 GTF3C1Q12789 2109 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 CELSR2Q9HCU4 2923 aa15.64■□□□□ 0.09
CLK3-210ENST00000563112 PCNX1Q96RV3 2341 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 CRYBG3Q68DQ2 2970 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 A0A0A6YYD5 115 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 TMEM200CA6NKL6 621 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 EEDO75530 441 aaKnown RBP15.63■□□□□ 0.09
CLK3-210ENST00000563112 SEMA3DO95025 777 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 ETHE1O95571 254 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 GPR75O95800 540 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 OTCP00480 354 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 RHOXF2BP0C7M4 288 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 NR2F6P10588 404 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 TAC1P20366 129 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 SOX3P41225 446 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 RNFT1Q5M7Z0 435 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 TEX35Q5T0J7 233 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 ADGRD1Q6QNK2 874 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 OPN5Q6U736 354 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 Q6ZPB1 254 aaPredicted RBP15.63■□□□□ 0.09
CLK3-210ENST00000563112 PAGE2Q7Z2X7 111 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 ST13P4Q8IZP2 240 aaPredicted RBP15.63■□□□□ 0.09
CLK3-210ENST00000563112 CNPY4Q8N129 248 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 ZNF808Q8N4W9 903 aaPredicted RBP15.63■□□□□ 0.09
CLK3-210ENST00000563112 ZNF321PQ8N8H1 164 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 C16orf52Q8NHV5 167 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 ZNF721Q8TF20 911 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 PPWD1Q96BP3 646 aaKnown RBP15.63■□□□□ 0.09
CLK3-210ENST00000563112 NSUN5Q96P11 429 aaKnown RBP15.63■□□□□ 0.09
CLK3-210ENST00000563112 RHOXF2Q9BQY4 288 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 ZNF717Q9BY31 904 aaPredicted RBP15.63■□□□□ 0.09
CLK3-210ENST00000563112 ELOVL6Q9H5J4 265 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 TINAGQ9UJW2 476 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 ASB4Q9Y574 426 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 CACNA1DQ01668 2161 aa15.63■□□□□ 0.09
CLK3-210ENST00000563112 IQANK1A0A1B0GTG1 560 aa15.62■□□□□ 0.09
CLK3-210ENST00000563112 ARHGAP10A1A4S6 786 aa15.62■□□□□ 0.09
CLK3-210ENST00000563112 PRSS44E7EML9 344 aa15.62■□□□□ 0.09
CLK3-210ENST00000563112 PRRG2O14669 202 aa15.62■□□□□ 0.09
CLK3-210ENST00000563112 OR10H2O60403 315 aa15.62■□□□□ 0.09
CLK3-210ENST00000563112 OR6B1O95007 311 aa15.62■□□□□ 0.09
CLK3-210ENST00000563112 SMSP52788 366 aa15.62■□□□□ 0.09
CLK3-210ENST00000563112 GPR85P60893 370 aa15.62■□□□□ 0.09
CLK3-210ENST00000563112 TRAF3Q13114 568 aa15.62■□□□□ 0.09
CLK3-210ENST00000563112 ART3Q13508 389 aa15.62■□□□□ 0.09
CLK3-210ENST00000563112 GGTA1PQ4G0N0 100 aa15.62■□□□□ 0.09
CLK3-210ENST00000563112 MRM1Q6IN84 353 aaKnown RBP15.62■□□□□ 0.09
CLK3-210ENST00000563112 TIFABQ6ZNK6 161 aa15.62■□□□□ 0.09
CLK3-210ENST00000563112 RTL4Q6ZR62 310 aa15.62■□□□□ 0.09
CLK3-210ENST00000563112 LCA5Q86VQ0 697 aa15.62■□□□□ 0.09
CLK3-210ENST00000563112 EID3Q8N140 333 aa15.62■□□□□ 0.09
CLK3-210ENST00000563112 ZFP62Q8NB50 900 aaPredicted RBP15.62■□□□□ 0.09
CLK3-210ENST00000563112 OR4F6Q8NGB9 312 aa15.62■□□□□ 0.09
CLK3-210ENST00000563112 ITLN2Q8WWU7 325 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms