RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	CLCA3P	Q9Y6N3	262 aa		7.63	□□□□□ -1.19
CKLF-208	ENST00000563092	CAPN6	Q9Y6Q1	641 aa		7.63	□□□□□ -1.19
CKLF-208	ENST00000563092	NCKAP5	O14513	1909 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	SH3D21	A4FU49	640 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	TRIM64	A6NGJ6	449 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	TRIM64B	A6NI03	449 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	DEFB108A	A8MXU0	73 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	SMPD2	O60906	423 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	ETHE1	O95571	254 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	HPN	P05981	417 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	ENO2	P09104	434 aa	Predicted RBP	7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	FBXO45	P0C2W1	286 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	HIST1H2AD	P20671	130 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	GSTM2	P28161	218 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	CDKN2D	P55273	166 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	LIM2	P55344	173 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	STXBP1	P61764	594 aa	Known RBP	7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	IGLV3-21	P80748	117 aa	Predicted RBP	7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	PPP2R2B	Q00005	443 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	DUSP8	Q13202	625 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	THOC5	Q13769	683 aa	Known RBP	7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	BMPR2	Q13873	1038 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	CAPRIN1	Q14444	709 aa	Known RBP	7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	EFTUD2	Q15029	972 aa	Known RBP eCLIP	7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	FNDC7	Q5VTL7	733 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	FBXW10	Q5XX13	1052 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	SBSN	Q6UWP8	590 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	VN1R5	Q7Z5H4	357 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	YTHDF3	Q7Z739	585 aa	Known RBP	7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	ADGRE4P	Q86SQ3	457 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	P3H2	Q8IVL5	708 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	C9orf40	Q8IXQ3	194 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	KLHDC8A	Q8IYD2	350 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	PM20D2	Q8IYS1	436 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	MYO1H	Q8N1T3	1032 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	RASGEF1C	Q8N431	466 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	FAM47B	Q8NA70	645 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	C2CD4A	Q8NCU7	369 aa	Predicted RBP	7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	LRRN4CL	Q8ND94	238 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	ATL1	Q8WXF7	558 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	KIAA1191	Q96A73	305 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	ZNF669	Q96BR6	464 aa	Predicted RBP	7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	SPACA9	Q96E40	222 aa	Predicted RBP	7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	HSPBAP1	Q96EW2	488 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	LINGO1	Q96FE5	620 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	PDLIM5	Q96HC4	596 aa	Known RBP	7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	HIST1H2AH	Q96KK5	128 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	MARK4	Q96L34	752 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	TSNARE1	Q96NA8	513 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	UCN2	Q96RP3	112 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	HIST1H2AJ	Q99878	128 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	AIF1L	Q9BQI0	150 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	YIPF4	Q9BSR8	244 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	H2AFJ	Q9BTM1	129 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	ALOXE3	Q9BYJ1	711 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	GSX2	Q9BZM3	304 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	EPB41L4B	Q9H329	900 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	TAS2R13	Q9NYV9	303 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	FETUB	Q9UGM5	382 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	MRPS33	Q9Y291	106 aa	Known RBP	7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	ZKSCAN5	Q9Y2L8	839 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	TESMIN	Q9Y4I5	508 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	MPDZ	O75970	2070 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	EML6	Q6ZMW3	1958 aa		7.62	□□□□□ -1.19
CKLF-208	ENST00000563092	KIAA1549	Q9HCM3	1950 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	SDR42E2	A6NKP2	422 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	C17orf105	B2RV13	164 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	B3GALT2	O43825	422 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	NRDC	O43847	1150 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	CLEC3A	O75596	197 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	SOX30	O94993	753 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	CDK9	P50750	372 aa	Known RBP	7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	ASPH	Q12797	758 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	SERTAD2	Q14140	314 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	POU4F3	Q15319	338 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	SF3B4	Q15427	424 aa	Known RBP eCLIP	7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	NTRK2	Q16620	822 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	SEL1L2	Q5TEA6	688 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	ANKRD22	Q5VYY1	191 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	ABHD17C	Q6PCB6	329 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	SLCO4C1	Q6ZQN7	724 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	SYDE1	Q6ZW31	735 aa	Predicted RBP	7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	CLNK	Q7Z7G1	428 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	GALNT7	Q86SF2	657 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	THOC6	Q86W42	341 aa	Known RBP	7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	CNTN4	Q8IWV2	1026 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	PHC2	Q8IXK0	858 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	PALM2	Q8IXS6	379 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	MCU	Q8NE86	351 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	TTL	Q8NG68	377 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	OR2L5	Q8NG80	312 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	OR10G3	Q8NGC4	313 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	ZPLD1	Q8TCW7	415 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	CALML6	Q8TD86	181 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	ANKRD9	Q96BM1	317 aa	Predicted RBP	7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	WDYHV1	Q96HA8	205 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	FAR2	Q96K12	515 aa		7.61	□□□□□ -1.19
CKLF-208	ENST00000563092	SERINC2	Q96SA4	455 aa		7.61	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms