RNA–Protein interactions for RNA: ENST00000562792.1

TRAPPC2L-204, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 4

Gene TRAPPC2L, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-204ENST00000562792 LINC01560Q8TB33 94 aa12.96□□□□□ -0.33
TRAPPC2L-204ENST00000562792 ZNF473Q8WTR7 871 aaKnown RBP12.96□□□□□ -0.33
TRAPPC2L-204ENST00000562792 RUNDC3BQ96NL0 473 aa12.96□□□□□ -0.33
TRAPPC2L-204ENST00000562792 MS4A8Q9BY19 250 aa12.96□□□□□ -0.33
TRAPPC2L-204ENST00000562792 OR51B5Q9H339 312 aa12.96□□□□□ -0.33
TRAPPC2L-204ENST00000562792 DNAJC11Q9NVH1 559 aa12.96□□□□□ -0.33
TRAPPC2L-204ENST00000562792 CNOT11Q9UKZ1 510 aaKnown RBP12.96□□□□□ -0.33
TRAPPC2L-204ENST00000562792 JRKLQ9Y4A0 524 aa12.96□□□□□ -0.33
TRAPPC2L-204ENST00000562792 CSPG4Q6UVK1 2322 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 LRRC14BA6NHZ5 514 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 ACOT7O00154 380 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 SUSD5O60279 629 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 H2AFYO75367 372 aaKnown RBP12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 CD1DP15813 335 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 BMP5P22003 454 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 GGT5P36269 586 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 KIR2DL3P43628 341 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 ZNF136P52737 540 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 HNRNPH2P55795 449 aaKnown RBP12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 IGLV3-21P80748 117 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 STX4Q12846 297 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 NDUFAF5Q5TEU4 345 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 GK5Q6ZS86 529 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 CLYBLQ8N0X4 340 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 GOLM1Q8NBJ4 401 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 PAQR8Q8TEZ7 354 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 WDR34Q96EX3 536 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 ZNF717Q9BY31 904 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 EPB41L4BQ9H329 900 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 LDAHQ9H6V9 325 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 PTBP2Q9UKA9 531 aaKnown RBP12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 SLC6A5Q9Y345 797 aa12.95□□□□□ -0.34
TRAPPC2L-204ENST00000562792 ANKDD1BA6NHY2 528 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 GLOD5A6NK44 160 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 FIGNL2A6NMB9 653 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 A6NNC1 897 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 FAM155BO75949 473 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 MSH2P43246 934 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 SLCO1A2P46721 670 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 FOLH1Q04609 750 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 MGAT5Q09328 741 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 CHIT1Q13231 466 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 MPEG1Q2M385 716 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 RIPPLY2Q5TAB7 128 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 TRIM40Q6P9F5 258 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 PAOXQ6QHF9 649 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 RGS9BPQ6ZS82 235 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 KLHL7Q8IXQ5 586 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 LRRC25Q8N386 305 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 NKAPQ8N5F7 415 aaKnown RBP12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 SNX31Q8N9S9 440 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 SIMC1Q8NDZ2 872 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 FBXO36Q8NEA4 188 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 OR8K3Q8NH51 312 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 DAZLQ92904 295 aaKnown RBP12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 EXT2Q93063 718 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 VPS39Q96JC1 886 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 TRIM31Q9BZY9 425 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 PLEKHF2Q9H8W4 249 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 ZFP64Q9NPA5 681 aa12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 CORO1CQ9ULV4 474 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC2L-204ENST00000562792 ARHGAP21Q5T5U3 1957 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 CLGNO14967 610 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 TMPRSS11DO60235 418 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 WDR1O75083 606 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 TRIM3O75382 744 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 EEDO75530 441 aaKnown RBP12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 SCELO95171 688 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 ATE1O95260 518 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 ACSL3O95573 720 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 P04436 131 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 FBXO45P0C2W1 286 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 CT62P0C5K7 136 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 CCDC166P0CW27 439 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 HIST1H1TP22492 207 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 SSTR1P30872 391 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 CEACAM8P31997 349 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 STT3AP46977 705 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 HNMTP50135 292 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 FBXW4P57775 412 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 HERVK_113P63132 956 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 ERVK-8P63133 956 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 CRYZQ08257 329 aaKnown RBP12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 PDIA2Q13087 525 aaKnown RBP12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 DUSP8Q13202 625 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 POU4F3Q15319 338 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 SLC25A35Q3KQZ1 300 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 ACSF3Q4G176 576 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 WLSQ5T9L3 541 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 SLC22A10Q63ZE4 541 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 KRT78Q8N1N4 520 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 VWA5B2Q8N398 1253 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 NEIL3Q8TAT5 605 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 ANKRD7Q92527 254 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 NTNG2Q96CW9 530 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 SPACA9Q96E40 222 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 SGCZQ96LD1 299 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 JSRP1Q96MG2 331 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 TIMP4Q99727 224 aa12.93□□□□□ -0.34
TRAPPC2L-204ENST00000562792 ERVK-6Q9BXR3 956 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms