RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 SLC35C2Q9NQQ7 365 aa9.3□□□□□ -0.92
SMG1-205ENST00000561947 ZNF624Q9P2J8 865 aaPredicted RBP9.3□□□□□ -0.92
SMG1-205ENST00000561947 KLF15Q9UIH9 416 aa9.3□□□□□ -0.92
SMG1-205ENST00000561947 CD207Q9UJ71 328 aa9.3□□□□□ -0.92
SMG1-205ENST00000561947 KLHL20Q9Y2M5 609 aa9.3□□□□□ -0.92
SMG1-205ENST00000561947 SH3GLB1Q9Y371 365 aa9.3□□□□□ -0.92
SMG1-205ENST00000561947 PTGES3LE9PB15 166 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 J3KTA2 159 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 HMGN4O00479 90 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 MAN2B1O00754 1011 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 NOL3O60936 208 aaKnown RBP9.29□□□□□ -0.92
SMG1-205ENST00000561947 GUCY1B2O75343 617 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 ATE1O95260 518 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 RECKO95980 971 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 ANXA8P13928 327 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 CD247P20963 164 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 MATN1P21941 496 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 NTSP30990 170 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 TPMTP51580 245 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 TP53BP2Q13625 1128 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 MAPK11Q15759 364 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 MICAQ29983 383 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 GTF2IRD2BQ6EKJ0 949 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 LAIR1Q6GTX8 287 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 GTF2IRD2Q86UP8 949 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 PAQR7Q86WK9 346 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 CCDC71Q8IV32 467 aaPredicted RBP9.29□□□□□ -0.92
SMG1-205ENST00000561947 LGI4Q8N135 537 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 SRFBP1Q8NEF9 429 aaKnown RBP9.29□□□□□ -0.92
SMG1-205ENST00000561947 OR52J3Q8NH60 311 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 CCL4L1Q8NHW4 92 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 RAB8BQ92930 207 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 SLC35G5Q96KT7 338 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 NAA50Q9GZZ1 169 aaKnown RBP9.29□□□□□ -0.92
SMG1-205ENST00000561947 SERHL2Q9H4I8 314 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 SYNPO2LQ9H987 977 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 TPRKBQ9Y3C4 175 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 PCDHGA2Q9Y5H1 932 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 XIRP2A4UGR9 3374 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 SPTBN5Q9NRC6 3674 aaKnown RBP9.29□□□□□ -0.92
SMG1-205ENST00000561947 A0A1W2PR48 441 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 TCRBV21S2A2A0A5A6 115 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 TRIM64BA6NI03 449 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 LRRC72A6NJI9 287 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 A8MVJ9 347 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 TNFRSF10CO14798 259 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 PRKRAO75569 313 aaKnown RBP9.29□□□□□ -0.92
SMG1-205ENST00000561947 PDE9AO76083 593 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 IFNW1P05000 195 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 RHCEP18577 417 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 ITIH1P19827 911 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 GPC1P35052 558 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 ACTR1BP42025 376 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 TSFMP43897 325 aaKnown RBP9.29□□□□□ -0.92
SMG1-205ENST00000561947 LIMS1P48059 325 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 NCBP2P52298 156 aaKnown RBP eCLIP9.29□□□□□ -0.92
SMG1-205ENST00000561947 TMBIM6P55061 237 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 ACTR1AP61163 376 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 KCNC4Q03721 635 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 DUSP7Q16829 419 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 TMEM31Q5JXX7 168 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 SLC44A2Q8IWA5 706 aaPredicted RBP9.29□□□□□ -0.92
SMG1-205ENST00000561947 DNASE1L2Q92874 299 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 MUL1Q969V5 352 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 HRASLS5Q96KN8 279 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 BBS4Q96RK4 519 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 TMEM168Q9H0V1 697 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 ACER3Q9NUN7 267 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 SCN3BQ9NY72 215 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 AASSQ9UDR5 926 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 APOBEC3BQ9UH17 382 aaKnown RBP9.29□□□□□ -0.92
SMG1-205ENST00000561947 PNMA8BQ9ULN7 279 aaPredicted RBP9.29□□□□□ -0.92
SMG1-205ENST00000561947 POFUT2Q9Y2G5 429 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 FAM32AQ9Y421 112 aaKnown RBP9.29□□□□□ -0.92
SMG1-205ENST00000561947 ATG4BQ9Y4P1 393 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 SZT2Q5T011 3432 aa9.29□□□□□ -0.92
SMG1-205ENST00000561947 A6NCN8 305 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 GLOD5A6NK44 160 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 BTN3A3O00478 584 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 MFN2O95140 757 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 RASGRP1O95267 797 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 AIFM1O95831 613 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 GABRG2P18507 467 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 PCMT1P22061 227 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 CERS1P27544 350 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 SLC19A1P41440 591 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 PXNP49023 591 aaPredicted RBP9.28□□□□□ -0.92
SMG1-205ENST00000561947 HMGA2P52926 109 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 STXBP1P61764 594 aaKnown RBP9.28□□□□□ -0.92
SMG1-205ENST00000561947 TFF2Q03403 129 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 TJAP1Q5JTD0 557 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 APOBEC4Q8WW27 367 aaKnown RBP9.28□□□□□ -0.92
SMG1-205ENST00000561947 SH3GL3Q99963 347 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 PSD2Q9BQI7 771 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 OR51I1Q9H343 314 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 SRMSQ9H3Y6 488 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 DUSP21Q9H596 190 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 RLIMQ9NVW2 624 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 PCDHGB1Q9Y5G3 927 aa9.28□□□□□ -0.92
SMG1-205ENST00000561947 TMEM247A6NEH6 219 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms